Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2885g00024 ATGAGCCTTAACTCTCATAATCTCCATTTGTGGTGGAGAGTTTCATCCTTTCTTCTTCTACTACTTCAATCTGTTGCTCTTAACTCTGATGGGGTTCTATTACTTAAATTCAAATACTCCATCCTCAGCGACCCACTATCAGTCTTAGAGAGTTGGAACTTCGATGATGCAACTCCATGTTCGTGGCATGGAGTTACATGCACTGAAATTGAAGACCCTGGTACCCCTGACTTGTTCAGAGTGACTAGCTTGGTTCTTCCAAACAGCCAGCTTCTGGGTTCCATTGCTGAAGAATTAGGGATGATCCAATACCTTAGCCATCTTGATCTCTCCAACAATTTATTCAACGGCTCTCTACCTATCTCTATCTTCAACTATTCTCAGCTTCAAGTGCTTTCTCTCTCAAACAATGTTATCTCAGGCAAGCTACCTAACTTGATTGGTAAATTGACAAGCCTTCAATTTTTCAACCTCTCTGACAATGCCTTTGCCGGGTTGATCCCAGAAAATCTCACTGCTTTACAAAATCTAACTGTTGTTTCTCTGAAGAGTAACTATTTTTCTGGTGGAATCCCAAATGGGTTCAACTCTGTTGAGATTTTGGATCTGTCCTCCAATTTGCTCAATGGCTCTCTCCCAAATGACTTTGGTGGTGAAAGCTTGCGCTATTTGAATGTCTCTTACAATAAGATTTCAGGAACGATACCACCAGCATTTGCAGAAAAGATTCCTAGAAACACTACAATTGATCTCTCATTCAATAATCTGACAGGGCCAATACCAGAGTCTCTGGCTTTGTTGAACCTTAAAACAGAATTGCTATCTGGGAATGCTGATCTATGCGGCAAGCCCCTGAAGATTCTGTGCTCTATTCCCTCTACTATGTCTACTTCTCCACCCAACATTACCAACACATCTTCACCAGCAATTGCAGCCATTCCAAAAACTATTGACACAAACCCAACAACAAACACAACAGGCAGCTCCAGTGATTCTCAGGGTGTGTCACAAAGTGGTCTAAAACCTGCTACCATAGCAGCCATCGTGGTAGGAGACTTGGTCGGCGTGGCCGTTTTGGCTCTGTTCATTCTTTTCGTCTACCAACAAAGAAAGAGAAGAGATCCAAAACCAACCATGGATGCTGCTGCTGCTGTTGCTGTTACTACCAACTCAGAAAAGAAAGAAGAAACGGTTGCAAAACAAGACCCGACTGTGAGAACACCCTCACTTCCTTGTTCATCATGCTTAACAATCAAAGAAGAGACTTCAGAAGCAACAAGCTCTGACAGTGACCATGAAAACACCACCGTTGAAATCACGGCACAAACAGGAAACTTTCCGAAAGAAGGAACTCTTGTAACCGTGGACGGCGAGACAAGGCTGGAGTTGGAGACTTTGCTGAAGGCTTCAGCGTATATTTTAGGAAACAGCAACGCGAGCATCGTGTACAAGGCAGTGCTTGAAGATGGGAGAGCCTTTGCTGTTAGAAGGGTTGGTGAGTGTGGGATTGAAAGGATGAAGGACTTTGAGAACCAAGTGCGTTCCATTGCAAAACTTCGCCATCCCAATTTGGTTAAGGTTCGTGCTTTCTGTTGGGGTCATGATGAGAAGCTTGTAATCTCTGACTATGTTCCCAATGGAAACCTCGCTAGCATTGGTTGCAGTTCATCATCTCCTTTTAACTTGGCATTGGAGGTGCGGTTGAAGATAGCAAAAGGGGTTGCACGAGGCCTGGCCTTCATTCATGACAAGAAACACGTGCATGGCAACGTTAAACCAAGCAACATCCTATTAAACTCAGAAATGGAACCCATTATCAGCGATTTTGGGCTGGACCGGCTCCTCTTGAATGACATAAACCAGAGAGCAAACGGTTCAGCCAGACAATTAATGGTGAATCAAAGAACCCAACAAGACCACCACCACCCCATGGATTCTAGCCCCTACCAAATGCCTTACCAAGCACCGGAGTCACTTCAAAACATCAAACCCAACCCCAAATGGGATGTGTATTCGTTTGGCATTGTCTTGTTGGAGCTTCTCACTGGGAGGGTTTTCTCGGACCGGGAGTTGGACCAGTGGCCTGTCCCCGGTTCGGTTGAAGAGGAGAAAACCCGGTTCTTGAGGATGGCTGACGTGGACATCAAATCTGAAATGGAGGAAGGTAGAGAAAATGTGATCCTGGCGTGCTTCAAGTTGGGGCTTAATTGTGCTTCTCTTGTACCACAAAAGAGACCCTCAATGAAAGAGGCTCTACAAATCTTGGACAAGAGCATTCATTCTTGA 2286 0.4466 MSLNSHNLHLWWRVSSFLLLLLQSVALNSDGVLLLKFKYSILSDPLSVLESWNFDDATPCSWHGVTCTEIEDPGTPDLFRVTSLVLPNSQLLGSIAEELGMIQYLSHLDLSNNLFNGSLPISIFNYSQLQVLSLSNNVISGKLPNLIGKLTSLQFFNLSDNAFAGLIPENLTALQNLTVVSLKSNYFSGGIPNGFNSVEILDLSSNLLNGSLPNDFGGESLRYLNVSYNKISGTIPPAFAEKIPRNTTIDLSFNNLTGPIPESLALLNLKTELLSGNADLCGKPLKILCSIPSTMSTSPPNITNTSSPAIAAIPKTIDTNPTTNTTGSSSDSQGVSQSGLKPATIAAIVVGDLVGVAVLALFILFVYQQRKRRDPKPTMDAAAAVAVTTNSEKKEETVAKQDPTVRTPSLPCSSCLTIKEETSEATSSDSDHENTTVEITAQTGNFPKEGTLVTVDGETRLELETLLKASAYILGNSNASIVYKAVLEDGRAFAVRRVGECGIERMKDFENQVRSIAKLRHPNLVKVRAFCWGHDEKLVISDYVPNGNLASIGCSSSSPFNLALEVRLKIAKGVARGLAFIHDKKHVHGNVKPSNILLNSEMEPIISDFGLDRLLLNDINQRANGSARQLMVNQRTQQDHHHPMDSSPYQMPYQAPESLQNIKPNPKWDVYSFGIVLLELLTGRVFSDRELDQWPVPGSVEEEKTRFLRMADVDIKSEMEEGRENVILACFKLGLNCASLVPQKRPSMKEALQILDKSIHS 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2885g00024 761 Gene3D Ribonuclease Inhibitor 27 195 IPR032675 -
Gabi2885g00024 761 Gene3D Phosphorylase Kinase; domain 1 453 543 - -
Gabi2885g00024 761 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gabi2885g00024 761 SUPERFAMILY L domain-like 31 287 - -
Gabi2885g00024 761 Gene3D Transferase(Phosphotransferase) domain 1 544 761 - -
Gabi2885g00024 761 MobiDBLite consensus disorder prediction 631 652 - -
Gabi2885g00024 761 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Gabi2885g00024 761 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515
Gabi2885g00024 761 Pfam Protein kinase domain 473 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2885g00024 761 MobiDBLite consensus disorder prediction 316 337 - -
Gabi2885g00024 761 ProSiteProfiles Protein kinase domain profile. 468 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2885g00024 761 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 196 757 IPR046959 -
Gabi2885g00024 761 Gene3D Ribonuclease Inhibitor 196 291 IPR032675 -
Gabi2885g00024 761 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 27 190 - -
Gabi2885g00024 761 CDD TM_EGFR-like 344 373 - -
Gabi2885g00024 761 SUPERFAMILY Protein kinase-like (PK-like) 473 755 IPR011009 -
Gabi2885g00024 761 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2885g00024 Gabi-Chr2885 170921 173512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2885g00024 26 757 Receptor kinase-like Gene Family AT2G15300 52.590 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi2885g00024 Pkinase 2.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2885g00024 - - gmx:100820334 1055.05