Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2885g00007 ATGGCAATAATGCACCATCACAATGATCATAATAATGAAAATGTTTCATCTGTTCTTGATGCCCTTTACTGTGATGAAGAAAAATGGGAAGAGGATGAAGATGAGTTATCTGATGAAAGTGATGTGACAACAAACAATGATGATGGGGTTCACTTGGACACTAGTTCTCTTTTCCCATTGCTCTTGTTGGAGCAAGATTTGTTCTGGGAAGATGAAGAACTAAACTCTCTCTTCTCCAAAGAGAAGAATCAACAAGAAACCTATAACGATCTGAAAAATGTGAATTTGGACTCTTCTCTCTCTCTGGCTCGTCTTCAAGCAGTAGAATGGATCCTTAAAGTCAATGCTCATCATGGATTCTCTGCTCTCACTGCAACACTGGCTGTTACTTACCTGGATAGGTTCCTTTTAAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCAGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTAGACCTTCAAGTGCAAGGCACCAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGTTACTAGTTCTCTCCACCCTCAAATGGAAGATGCACCCTGTGACCCCACTCTCATTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACCCATCTTCACTGGGAGTTTCTCAGGCGCTGCGAGCATCTTCTTTTATCTGTGCTTTTAGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGCATGTTATAGATCAGATTGAGCACAATGATGGGATGAAGTACAAAAATCAGCTTCTGGGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAATGCTATAATGCCATTCTCCAGCTCTCAAATGCCAATAATTATGCTTATAAGAGCCCTAGCAAGCGCAAGTATGACCAAATACCCAGCAGCCCAAGTGGCATAATTGATGCTGCTTTTAGCTCTGATGGTTCCAACGATTCGTGGACAGTGGGGTCATCATTATGTTCACCATCAGAGCCTCTGTTCAAGAGGAGTAGAATCCAAGGACAAAAAATGAAATTGTCACCATTCAACCGGGTCATTGTTGGAATTGTTGGAAGCTCCCCTTAA 1143 0.4147 MAIMHHHNDHNNENVSSVLDALYCDEEKWEEDEDELSDESDVTTNNDDGVHLDTSSLFPLLLLEQDLFWEDEELNSLFSKEKNQQETYNDLKNVNLDSSLSLARLQAVEWILKVNAHHGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQGTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEHNDGMKYKNQLLGVLKISKEKVDECYNAILQLSNANNYAYKSPSKRKYDQIPSSPSGIIDAAFSSDGSNDSWTVGSSLCSPSEPLFKRSRIQGQKMKLSPFNRVIVGIVGSSP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2885g00007 380 Pfam Cyclin, C-terminal domain 206 317 IPR004367 -
Gabi2885g00007 380 Gene3D - 87 204 - -
Gabi2885g00007 380 SMART cyclin_7 109 197 IPR013763 -
Gabi2885g00007 380 FunFam CYCLIN D32 205 294 - -
Gabi2885g00007 380 SUPERFAMILY Cyclin-like 207 315 IPR036915 -
Gabi2885g00007 380 SMART Cyclin_C_2 206 324 IPR004367 -
Gabi2885g00007 380 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Gabi2885g00007 380 CDD CYCLIN_AtCycD-like_rpt1 103 201 - -
Gabi2885g00007 380 Pfam Cyclin, N-terminal domain 75 203 IPR006671 -
Gabi2885g00007 380 CDD CYCLIN_AtCycD-like_rpt2 206 296 - -
Gabi2885g00007 380 SUPERFAMILY Cyclin-like 68 204 IPR036915 -
Gabi2885g00007 380 FunFam D3-type cyclin 97 204 - -
Gabi2885g00007 380 PANTHER CYCLINS 55 304 IPR039361 -
Gabi2885g00007 380 Gene3D - 74 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2885g00007 Gabi-Chr2885 69082 70767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2885g00007 1 299 Core Cell Cycle Gene Families AT4G34160 56.856 8.57e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2885g00007 K14505 - gmx:547740 575.089