Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2881g00027 | ATGAGCAGCAACATGAACAATTTCACACCTTTGCCAGGGCCTTGGAGGAGAGGTGTTAGAGCCTATGATGTCCACACTTTCAATAATAGTGAATCCAATGAGGTGCCTGTGTTTTACAGATCTCACTCTACTCAGGCCACTCAGGATGACAGGAGTTCAGGTGAACTAAATCCACTGCGGTTGTGGGAACTCAGAACTCCTTCAGGACTTCACAGTATACCGAATTTTCCAGCACAACCTCATAGCAGACAACAAATTCATGTTCACAATGGTAACATGGGAAGGAGTTTCAACCCCAGGCACAGAGAGATTTTCCCGAGGTCACCTCCAAGATCCACAGTCCAAACATGCACACAAGTTCCCCCAGTGGTAGAAAACTCCAAATCAACAGCTTTGAGGAAGCTTAAGAAAGAAGTCTATAACCCTATCCCAAAATGGTTGGCTAAGAAAGTGAGCTTATATTATAGAGATAATGCTGTAGATGATTTGAAAGAGAGATTGAAAGAAAAGGATGAAGATGGTAAAAGGTGTGCTATTTGCTTGGATGATTTTAAGCCCAAAGAAGAGGTTATGGTCACTCCGTGTAACCACATGTTTCATGAGGATTGCATAGTACCTTGGTTAACAAGCAAAGGTCAGTGCCCAGTTTGTAGGTTTGTGATTTATGAGAGCAATGACATTGCCAATTTGGAACCAAGTGACATGGTTGCTGGTGAGCTTTTGTCAATTTTGAGAGCCATGGAAGAAGCTTTTCAATTGGGCAGTGTAACTCATATGTACACATAA | 786 | 0.4237 | MSSNMNNFTPLPGPWRRGVRAYDVHTFNNSESNEVPVFYRSHSTQATQDDRSSGELNPLRLWELRTPSGLHSIPNFPAQPHSRQQIHVHNGNMGRSFNPRHREIFPRSPPRSTVQTCTQVPPVVENSKSTALRKLKKEVYNPIPKWLAKKVSLYYRDNAVDDLKERLKEKDEDGKRCAICLDDFKPKEEVMVTPCNHMFHEDCIVPWLTSKGQCPVCRFVIYESNDIANLEPSDMVAGELLSILRAMEEAFQLGSVTHMYT | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2881g00027 | 261 | SMART | ring_2 | 177 | 217 | IPR001841 | - | |
Gabi2881g00027 | 261 | Pfam | Ring finger domain | 176 | 218 | IPR001841 | - | |
Gabi2881g00027 | 261 | FunFam | RING/U-box superfamily protein | 161 | 234 | - | - | |
Gabi2881g00027 | 261 | ProSiteProfiles | Zinc finger RING-type profile. | 177 | 218 | IPR001841 | - | |
Gabi2881g00027 | 261 | SMART | ringv_2 | 176 | 218 | IPR011016 | GO:0008270 | |
Gabi2881g00027 | 261 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 162 | 232 | IPR013083 | - | |
Gabi2881g00027 | 261 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 78 | 219 | - | - | |
Gabi2881g00027 | 261 | SUPERFAMILY | RING/U-box | 168 | 224 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2881g00027 | Gabi-Chr2881 | 314939 | 316946 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2881g00027 | 81 | 255 | C3H Transcription Factor Family | AT3G58720 | 42.188 | 4.00e-42 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2881g00027 | - | - | gmx:100810607 | 349.362 |