Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2881g00013 ATGGATTCCGTTAGTAGTGTACTGTTGTTCCTGCTGGCATGCATTTTCATGCATGTTGTTCTTTCACTGCATGCAAGAACCAAAAAAACAAACTACAAGCTTCCTCCAGGACCTTCATTTCTCACTGTCATTGGAAACCTTCCTGAATTCTGCCTTAGGCCACAACAAACAATGGCGAAGCTTGCCAAAGTGTATGGCCCAATAATGCGTTTGAGGCTAGGCCAAGCAACAAGCATAATCGTGTCTTCACCAGAATTGGCCAAAGAGGTTATGCAGACACATGATATGTACTTAGCAGACAGAACAACTCCTGATGTTACATCAGCCCACGACCACAAAAATTTTAGCTTGCCCTTCCTCTGTGTTACCCCTCTTTGGCATAACCTAAGGAAAATATGCCATAACCACTTATTCTCCAACAAGACCCTCGATGCAAGCCAAAACCTTAGACGCAAGAAACTGCAAGAACTACTTAATGATATGCATAAAAACAGTTTAAACGGCGAAGCAATTGATGTTGGAAGAGCAGCTTTCAAGGCTTGCATTAATTTTTTATCATACACTTTTGTGTCTGAGGATTTTGTTCGGTCTATAGGTGATGAGTACAAGGATATAATAGCGACACTCTTAAAAGCAACCGGTACACCAAATGTCGTTGACTTTTTCCCAGTGTTGAAGATAATTGACCCTCAAGGCATTAGAAGGCACACTTCTGCTTATATTACGAAGGTGTTCCATCACTTGGATTGCTTGATTGATAGACGTTTGAAGCTAAGAGAAGGGGGAAATTATGTCACAAACAACGACATGTTAGACATCTTGCTCGACATTTCTCAAGAGGATAGCCAGAAGATGGACAAAAAACTGATTAAACACTTTTTGCTTGATCTACTTGTGGCGGGAACAGATACAACTGCATATGCATTAGAAAGGTCATTGACTGAACTAATACACAATCCAGGAGATATGTACAAAGCCAAAAAGGAGCTTGAGGAAACCATTGGAATAGGGAATCCTGTTGAGGAATCAGACGTTGCTAGACTTCCATTCTTACAAGCAGTAATAAAAGAGACATTGCGTTTATACCCACCAGCTCCACTTTTACTACCTCGAAGAGCGAGGATAGATGTGGAAATAGCAGGATACACAATTCCAAAGGGTACACAAGTGCTCATCAATGAATGGGCTATTGGTAGGAGTCAAAACATATGGGACAATGCGAATGTATTTTTACCAGAAAGGTTCATGGAATCTGACATTGATGTGAAAGGTCGTCATTTTCAGCTCACACCATTTGGCAGTGGGAGAAGAGTTTGTCCTGGCTCACCACTTGCTATTAGGATGTTGCATTTGATGTTGGGGTCTTTGATCAACACTTTTGATTGGAAACTTGAAAATAACATTCAACCTAAGGATATGGACTTGGACAAAACCCTGCGAGCTATTCCTGTTGCAATAAGCAACTAA 1467 0.4097 MDSVSSVLLFLLACIFMHVVLSLHARTKKTNYKLPPGPSFLTVIGNLPEFCLRPQQTMAKLAKVYGPIMRLRLGQATSIIVSSPELAKEVMQTHDMYLADRTTPDVTSAHDHKNFSLPFLCVTPLWHNLRKICHNHLFSNKTLDASQNLRRKKLQELLNDMHKNSLNGEAIDVGRAAFKACINFLSYTFVSEDFVRSIGDEYKDIIATLLKATGTPNVVDFFPVLKIIDPQGIRRHTSAYITKVFHHLDCLIDRRLKLREGGNYVTNNDMLDILLDISQEDSQKMDKKLIKHFLLDLLVAGTDTTAYALERSLTELIHNPGDMYKAKKELEETIGIGNPVEESDVARLPFLQAVIKETLRLYPPAPLLLPRRARIDVEIAGYTIPKGTQVLINEWAIGRSQNIWDNANVFLPERFMESDIDVKGRHFQLTPFGSGRRVCPGSPLAIRMLHLMLGSLINTFDWKLENNIQPKDMDLDKTLRAIPVAISN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2881g00013 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 SUPERFAMILY Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Gabi2881g00013 488 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 Gene3D Cytochrome P450 19 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2881g00013 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 478 - -
Gabi2881g00013 488 FunFam Cytochrome P450 76C4 26 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2881g00013 Gabi-Chr2881 126435 128187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2881g00013 1 484 Cytochrome P450 AT2G45550 41.188 4.07e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2881g00013 - - gmx:100800810 675.241