Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2881g00007 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCTTCCTCTTCCAATGGTGGTGGGAATGTCCAGAGATCAAAGAGCTTTGCTTTTAGAGCTCCACAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGCTCGTCTAACCGAGGACGAGGCACGATTCTATGCGGCTGAAGTTGTGGATGCTTTAGAATACATTCATAATTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACGGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATTACTGTCCTTCCAAATGCTGCATCAGATGACAAAGCATGCACGTTTGTCGGAACTGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGATCTCTGGGCTCTTGGCTGCACGTTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGACTACTTTTCTGAGGAAGCAAGAGACCTAATTGACCGGCTATTGGATTTGGACCCTAGCAGGAGACCAGGTGCAGGACCTGATGGTTACGCTGCTTTGAAAAGGCATCTGTTTTTCAAGGGAGTTGATTGGGATCACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAGCCTGGGCTTCTGCTAGACAACCTGATGGTGCTACATCATCTTCCGAAGGAACTGGTCACATAA 1062 0.4256 MLEMEKDFDSKLKIQGNSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKARLTEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSEEARDLIDRLLDLDPSRRPGAGPDGYAALKRHLFFKGVDWDHLRAQIPPKLALEPGLLLDNLMVLHHLPKELVT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2881g00007 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gabi2881g00007 353 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00007 353 SUPERFAMILY Protein kinase-like (PK-like) 29 331 IPR011009 -
Gabi2881g00007 353 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 326 - -
Gabi2881g00007 353 FunFam 3-phosphoinositide-dependent protein kinase 2-like 131 329 - -
Gabi2881g00007 353 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00007 353 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Gabi2881g00007 353 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Gabi2881g00007 353 MobiDBLite consensus disorder prediction 13 27 - -
Gabi2881g00007 353 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Gabi2881g00007 353 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2881g00007 353 FunFam 3-phosphoinositide-dependent protein kinase 2-like 45 130 - -
Gabi2881g00007 353 Pfam Protein kinase domain 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2881g00007 Gabi-Chr2881 18902 24026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2881g00007 1 335 AGC Kinase Gene Family AT3G10540 86.269 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Gabi2881g00007 Pkinase 1.6e-66 CL0016