Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2881g00006 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCTTCCTCTTCCAATGGTGGTGGGAATGTCCAGAGATCAAAGAGCTTTGCTTTTAGAGCTCCACAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGCTCGTCTAACCGAGGACGAGGCACGATTCTATGCGGCTGAAGTTGTGGATGCTTTAGAATACATTCATAATTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACGGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATTACTGTCCTTCCAAATGCTGCATCAGATGACAAAGCATGCACGTTTGTCGGAACTGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGATCTCTGGGCTCTTGGCTGCACGTTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGACTACTTTTCTGAGGAAGCAAGAGACCTAATTGACCGGCTATTGGATTTGGACCCTAGCAGGAGACCAGGTGCAGGACCTGATGGTTACGCTGCTTTGAAAAGGCATCTGTTTTTCAAGGGAGTTGATTGGGATCACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAGCCTGGGACTCAGTCGCCTGCGGCTGATGATGTTCATGAGTCATCATGGAGTCCTTCTCACACTGGGGATGGTTCTGCAGCTTCTGCTAGACAACCTGATGGTGCTACATCATCTTCCGAAGGAACTGGTCACATAACCAGGCTAGCTTCGATTGATTCATTCGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTGTTCTTATGATTTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCAAAGTTGATCTATGTGGACCCTTCAAAGCTAATTGTGAAGGGAAATATAATATGGTCTGACAATCCAAATGATTTAAGCATCCAAGTGGCTAGTCCATCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCTATTGAAGGACTTCAAAACCGGTGA 1479 0.4226 MLEMEKDFDSKLKIQGNSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKARLTEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSEEARDLIDRLLDLDPSRRPGAGPDGYAALKRHLFFKGVDWDHLRAQIPPKLALEPGTQSPAADDVHESSWSPSHTGDGSAASARQPDGATSSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVASPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2881g00006 492 MobiDBLite consensus disorder prediction 330 375 - -
Gabi2881g00006 492 MobiDBLite consensus disorder prediction 341 375 - -
Gabi2881g00006 492 SUPERFAMILY PH domain-like 308 491 - -
Gabi2881g00006 492 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Gabi2881g00006 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gabi2881g00006 492 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Gabi2881g00006 492 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00006 492 SUPERFAMILY Protein kinase-like (PK-like) 44 371 IPR011009 -
Gabi2881g00006 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 341 - -
Gabi2881g00006 492 FunFam 3-phosphoinositide-dependent protein kinase 2-like 131 329 - -
Gabi2881g00006 492 Pfam Protein kinase domain 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00006 492 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00006 492 Pfam PH domain 389 491 IPR033931 -
Gabi2881g00006 492 FunFam 3-phosphoinositide-dependent protein kinase 1 363 492 - -
Gabi2881g00006 492 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Gabi2881g00006 492 FunFam 3-phosphoinositide-dependent protein kinase 2-like 45 130 - -
Gabi2881g00006 492 Coils Coil 472 492 - -
Gabi2881g00006 492 MobiDBLite consensus disorder prediction 13 27 - -
Gabi2881g00006 492 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2881g00006 492 Gene3D - 367 492 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2881g00006 Gabi-Chr2881 17894 24026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2881g00006 1 492 AGC Kinase Gene Family AT3G10540 82.724 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Gabi2881g00006 Pkinase 4.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2881g00006 K06276 - gmx:100788780 926.391