Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2881g00005 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCTTCCTCTTCCAATGGTGGTGGGAATGTCCAGAGATCAAAGAGCTTTGCTTTTAGAGCTCCACAGGAGAATTACACCATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGCTCGTCTAACCGAGGACGAGGCACGATTCTATGCGGCTGAAGTTGTGGATGCTTTAGAATACATTCATAATTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTATTACTTACGGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATTACTGTCCTTCCAAATGCTGCATCAGATGACAAAGCATGCACGTTTGTCGGAACTGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGATCTCTGGGCTCTTGGCTGCACGTTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGACTACTTTTCTGAGGAAGCAAGAGACCTAATTGACCGGCTATTGGATTTGGACCCTAGCAGGAGACCAGGTGCAGGACCTGATGGTTACGCTGCTTTGAAAAGGCATCTGTTTTTCAAGGGAGTTGATTGGGATCACTTAAGGGCACAAATTCCTCCAAAACTTGCTCTGGAGCCTGGGTCGCCTGCGGCTGATGATGTTCATGAGTCATCATGGAGTCCTTCTCACACTGGGGATGGTTCTGCAGCTTCTGCTAGACAACCTGATGGTGCTACATCATCTTCCGAAGGAACTGGTCACATAACCAGGCTAGCTTCGATTGATTCATTCGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTGTTCTTATGATTTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCAAAGTTGATCTATGTGGACCCTTCAAAGCTAATTGTGAAGGGAAATATAATATGGTCTGACAATCCAAATGATTTAAGCATCCAAGTGGCTAGTCCATCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCTATTGAAGGACTTCAAAACCGGTGA 1473 0.4223 MLEMEKDFDSKLKIQGNSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKARLTEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRFPDYFSEEARDLIDRLLDLDPSRRPGAGPDGYAALKRHLFFKGVDWDHLRAQIPPKLALEPGSPAADDVHESSWSPSHTGDGSAASARQPDGATSSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVASPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2881g00005 490 Pfam PH domain 387 489 IPR033931 -
Gabi2881g00005 490 Pfam Protein kinase domain 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00005 490 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Gabi2881g00005 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Gabi2881g00005 490 MobiDBLite consensus disorder prediction 333 373 - -
Gabi2881g00005 490 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Gabi2881g00005 490 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00005 490 Coils Coil 470 490 - -
Gabi2881g00005 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 341 - -
Gabi2881g00005 490 MobiDBLite consensus disorder prediction 343 373 - -
Gabi2881g00005 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 131 329 - -
Gabi2881g00005 490 FunFam 3-phosphoinositide-dependent protein kinase 1 361 490 - -
Gabi2881g00005 490 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2881g00005 490 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Gabi2881g00005 490 FunFam 3-phosphoinositide-dependent protein kinase 2-like 45 130 - -
Gabi2881g00005 490 SUPERFAMILY PH domain-like 308 489 - -
Gabi2881g00005 490 MobiDBLite consensus disorder prediction 13 27 - -
Gabi2881g00005 490 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2881g00005 490 Gene3D - 365 490 IPR011993 -
Gabi2881g00005 490 SUPERFAMILY Protein kinase-like (PK-like) 44 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2881g00005 Gabi-Chr2881 17893 24026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2881g00005 1 490 AGC Kinase Gene Family AT3G10540 82.688 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Gabi2881g00005 Pkinase 4.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2881g00005 K06276 - gmx:100788780 917.531