Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2880g00033 ATGGACAACGTTGCGAAGGAACCGTTTAATATGTCAGATGGATCAGTAATTTGCTATACACCAACTTTGGCAACAACAAATGGTGTATGGCAGGGAGATAACCCTTTAAATTTCTCCCTCCCTCTCTTCGTCTTGCAATTAACGTTAGTTGTTCTTTCCACACGTTTCTTTCTTTTCCTCCTCAAGCCATTTCACCAACCCCGTGTAATTGCTGAAATCATAGGTGGATTGCTGTTGGGCCCATCAGTGCTTGGTAGAAATGAGAAATATGGAAGTACTGTATTCCCTCTAAAAAGTGTGGTGGTGCTTGAGACAATGGCAAACATAGGTGTCATATACTTCTTGTTCCTAGTTGGGTTAGAGATGGACCTTTCTTTTATCAAACGCACTGGAAAAAAGACTGTGTCCATAGCCCTTGCTGGTATGATATTGCCATTTTTAGTTGGTGTTGGTGTCTCCTTTTTATTAAGAGACAGAGAGAAAAATATGAGCATGGGCATGGGCAGCTATATCCTTTATCTTGGTATTACTTTATCTGTGACTGCATTCCCAGTGCTTGCTCGCACACTTGTTGAGCTGAAACTTATCAACACAGAGCTCGGCAAGCTTGCCCTCTCAACTTCTCTCATCAGTGATGTGTGTGCCTGGATTTTGCTTGCTCTAGCTATTGCTTTATCAGAGCAACATATTAGTTCCTGGGCCTCCATTTGGGTTATACTATCAAATGTTGTTTTTGTTGCTTTCTGCATTCTTATTGTTAGACCAACAGTTAAGTGGATGATCAAGAGAACCCCAGAAGGAAAACCCTTCAGTGAGTTCCAAATATGTATGGTGCTCATTGGAGTTATGATCTCAGCCTTCGTTACGGATGTACTTGGAACACATTCTGTTTTTGGAGCTTTTGTATATGGCCTAGTAATTCCAAATGGCCCACTTACAGCTGCTATAATAGAAAAGCTTGAAGATTTTGTTTCCGGGCTTTTACTCCCACTTTTTTATGTCATTAGTGGGCTTAAGACTGATATCAACTCAATCAGTGCAGCTGGTAGATGGTTGATAGTACTCATGGTGATTCCTCTTGCTTGTTTGGGCAAGATCCTCGGGACTACTCTTATTTCAGCCTTTTTCCAGATACCAACCCGTGATGGTATTGTTCTTGGTTTACTTATGAATACTAAAGGCCTTATTGAAATTATTGTGCTCAATGTTGGGAGGGAACAAAAGGTCTTGAGTGAGGAAATATTTTCAATTATGATTGTTATAACGCTTATAATGACCGGAATAATTCCACCCATTGTGACATTAATTTATAAGCCAAGAAAAAGGCTCATACCTTACAAAAAGAGAACAGTGCAAAATTCAAGACTTGATGCAGAGTTTCGGGTGCTGGTGTGCATTCACGCACCTAGAAATGTGCCTACAATAATTAATCTCATCGAAGCAACCCACCCCAACAAAAGGTCTCCCATATGTGCTTATGTGCTCCACTTGGTTGAACTCACTGGTAGAGCTTCTGCTATGCTCATTGTCCATGCTGATCAACAATCAGGACGCCCAGCCCTCAACAAAACACAAGCACAAACCGACCACATTATCACAGCATTTCAGAACTTTGAGAAACACGTTGGTTATGTCTCAGTCCAACCCTTGACAGCTGTTTCCCCTTACTCCACCATGCATGAAGACATATGCAATTTGGCAGAGGAGAAAAGGGTATCCATCATCATCATTCCTTTCCATAAGCAACAAACAGTTGATGGAGATATGAAGGACACAAATCCAGCATTCAGAATGGTGAACCACAACTTATTACAGAACTCTCCTTGCTCAGTTGGTATACTTGTTGATAGAGGCCTTAACGGTTCCAACCGCTTAACAGCAAATCAATCATCTCATCAGGTTGCTGTGTTGTTTTTTGGAGGACCAGATGATAGAGAAGCACTTTCCTATGGATGGAGAATGTCAAGGCAGCAAAGGGTACGCCTCACTGTCATGCATTTCATTCCAGGCAAGGATGCAACTAGGCCTCCACCTACAGATCAGTTAAACACTGAGGATGAACTAGACAATCAAAACACAAATACTGGGAAGAGTGACAACAAAATGGATGAGGAGTTTATTAATGAGTTCAGAATGATGGCTGCAAATGATGACTCAATTGTTTACATGGACAAGGTTGTAAATAATGGGGAGGAAACAGTATCTGCTATAAGATCAATGAACAATGTCAATGACCTCTTCATAGTTGGGAGAGGTCAAGGTACAAGTTCACCACTAACGGATGGCCTAACAGATTGGAGTGAATGCCCCGAGTTGGGAGCCATTGGGGATTTGTTAGCTTCATCAGACTTTGAAACAACAGCTTCAGTGTTGGTGATACATCAATATGTTGAGCAAGGAACAGAAGGTGAGGACATTTTTGTAACTGAAAAACCATGGCAAACAAGTGAAAACTATCATAATGTAAAACAACATATGGGAAGATATACAACAGCGCCAGTCTATATTGGACAACCTCTATTCTAA 2526 0.4113 MDNVAKEPFNMSDGSVICYTPTLATTNGVWQGDNPLNFSLPLFVLQLTLVVLSTRFFLFLLKPFHQPRVIAEIIGGLLLGPSVLGRNEKYGSTVFPLKSVVVLETMANIGVIYFLFLVGLEMDLSFIKRTGKKTVSIALAGMILPFLVGVGVSFLLRDREKNMSMGMGSYILYLGITLSVTAFPVLARTLVELKLINTELGKLALSTSLISDVCAWILLALAIALSEQHISSWASIWVILSNVVFVAFCILIVRPTVKWMIKRTPEGKPFSEFQICMVLIGVMISAFVTDVLGTHSVFGAFVYGLVIPNGPLTAAIIEKLEDFVSGLLLPLFYVISGLKTDINSISAAGRWLIVLMVIPLACLGKILGTTLISAFFQIPTRDGIVLGLLMNTKGLIEIIVLNVGREQKVLSEEIFSIMIVITLIMTGIIPPIVTLIYKPRKRLIPYKKRTVQNSRLDAEFRVLVCIHAPRNVPTIINLIEATHPNKRSPICAYVLHLVELTGRASAMLIVHADQQSGRPALNKTQAQTDHIITAFQNFEKHVGYVSVQPLTAVSPYSTMHEDICNLAEEKRVSIIIIPFHKQQTVDGDMKDTNPAFRMVNHNLLQNSPCSVGILVDRGLNGSNRLTANQSSHQVAVLFFGGPDDREALSYGWRMSRQQRVRLTVMHFIPGKDATRPPPTDQLNTEDELDNQNTNTGKSDNKMDEEFINEFRMMAANDDSIVYMDKVVNNGEETVSAIRSMNNVNDLFIVGRGQGTSSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVIHQYVEQGTEGEDIFVTEKPWQTSENYHNVKQHMGRYTTAPVYIGQPLF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2880g00033 841 Gene3D - 42 443 IPR038770 -
Gabi2880g00033 841 FunFam Cation/H(+) antiporter 15 42 444 - -
Gabi2880g00033 841 MobiDBLite consensus disorder prediction 677 697 - -
Gabi2880g00033 841 MobiDBLite consensus disorder prediction 669 700 - -
Gabi2880g00033 841 PANTHER CATION/H + ANTIPORTER 17 798 - -
Gabi2880g00033 841 Gene3D - 486 755 - -
Gabi2880g00033 841 Pfam Sodium/hydrogen exchanger family 48 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2880g00033 Gabi-Chr2880 280656 283812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2880g00033 5 817 Antiporter Super Family AT2G13620 62.668 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2880g00033 K26731 - gmx:100800514 1276.92