Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2880g00032 ATGGAGTTTGATCTTGAAAACCCACTAGCCATCTTCAATGAAGAGGAAAGCCGTAATATATCAGAACTCTTTGAATCCGAATCTGATCACATTCTCTCACCAAACTCTCCAAGTTCAACAAGTTTTCACGTTTCTTTCAGTCGTGAAGCCATTTCTCTCATACATAAGGTGAAAGTTAGGGTCCATATAGTCCAGCTTTCATGCAATTTGGACCCATTTGTTGCTTATCTTGCTATAAATTACTTGCACCGTTTCATATCAAGGCATGAAATTCCAGGGAAGCCGTGGGTACTAAGGCTCGTTGTCATATCATGTCTTTCTCTAGCGTCAAAGATGAAGAACACACCTTTATCACTTTCCCATAATATCCAGAACAAAGGTTTCATCTTTGATGCTCGAAGCATTCAAAAAATGGAGCTTCTAATTCTTGGGGTTCTGAAATGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGCGCTTCTTCATCTCTTTGGCTGAAATCAAAGACCAGTCACTGAAACAAGCACTTAAAAAGCGAGCTTCAGAGATAATCTTCAATGCTCATAATGACATTAAGCTATCAGAGCATAAACCTTCAACTATTGCTGCAACTGCTCTTATATATGCGTCTAATGAACTAATCCCGCATCAATATTTTATCTTGAGAGGAACAATTACAGCTTGTGAGTATCTAGATGAGGAGGCATTTTCCAAGTGCTATGAGTTGATGCAAGAGATGGTGAGAATGGAAGCAAATGAGTCAACTATAGATACAAGCTTTTTAAGCACTGAAACTCCAATGAGTGTACTGGAGAGAAGCTCCAAACGGTAG 834 0.3921 MEFDLENPLAIFNEEESRNISELFESESDHILSPNSPSSTSFHVSFSREAISLIHKVKVRVHIVQLSCNLDPFVAYLAINYLHRFISRHEIPGKPWVLRLVVISCLSLASKMKNTPLSLSHNIQNKGFIFDARSIQKMELLILGVLKWRMRSITPFPFLRFFISLAEIKDQSLKQALKKRASEIIFNAHNDIKLSEHKPSTIAATALIYASNELIPHQYFILRGTITACEYLDEEAFSKCYELMQEMVRMEANESTIDTSFLSTETPMSVLERSSKR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2880g00032 277 CDD CYCLIN_AtCycD-like_rpt2 153 244 - -
Gabi2880g00032 277 SMART Cyclin_C_2 153 274 IPR004367 -
Gabi2880g00032 277 FunFam D6-type cyclin 150 242 - -
Gabi2880g00032 277 SUPERFAMILY Cyclin-like 135 251 IPR036915 -
Gabi2880g00032 277 Gene3D - 152 242 - -
Gabi2880g00032 277 Gene3D - 65 151 - -
Gabi2880g00032 277 Pfam Cyclin, C-terminal domain 153 255 IPR004367 -
Gabi2880g00032 277 SMART cyclin_7 59 144 IPR013763 -
Gabi2880g00032 277 Pfam Cyclin, N-terminal domain 64 150 IPR006671 -
Gabi2880g00032 277 PANTHER CYCLINS 64 250 IPR039361 -
Gabi2880g00032 277 FunFam D6-type cyclin 35 149 - -
Gabi2880g00032 277 SUPERFAMILY Cyclin-like 62 150 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2880g00032 Gabi-Chr2880 270566 271901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2880g00032 1 273 Core Cell Cycle Gene Families AT4G03270 39.373 2.11e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2880g00032 K18812 - gmx:100799985 354.755