Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi287g00007 ATGGGGTTAGGTGCTGAGAATGGTAAGGTGGTGGAGTCAAAATGGAGGAGGAAGAAGAAGAAGAAGAAGATAGAGGATGAGGAAAAGAGTGGGTGTTGGGTTAGGCTGAGATTCATGGGTAGCTGCATTTCCTCAAGATCCAAGGTTGATAGCTCAGTCAGCGGTACCAGCACTCATTATGGTACTGAAAGTAAATCAACTAATGATACAAGTAGAGACCAACCAACAGCTCCAGCGGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCAAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGACTGCGAAAATTCTCTTTCAATGACCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAGAGTTTCCTTGGGGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCCGTGAAACCTGGCACAGGGCTTACCGTTGCTGTAAAAACCCTTAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATAATCAAAGGTTGCTGGTGTATGAGTTCATGGCTCGGGGAAGCCTGGAAAACCACTTATTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCGCTAGGAGCTGCTAAGGGCCTTACTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCAAATATACTATTAGATGCTGACTACAATGCAAAACTCTCGGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACACGAGTGATGGGAACCTACGGTTATGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAGAAGCGACGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGATAAACACAGACCCAATGGTGAACATAACCTTGTGGAATGGGCTCGGCCTTATCTCGGGGAGAGGAGAAGGTTCTATAGGTTGATAGACCCTCGCCTGGAAGGTCACTTTTCCATAAAAGGAGCTCAGAAAGCAGCACAATTGGCTGCTCACTGCCTTAATAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTAGAGGCTTTAAAGCCTCTCCCAAACCTTAAGGACATGGCAAGTTCTTTATATTATTTCCAGACAATGCAAGCTGACCGCTTTAGAGCAAGCCCAAATACTAGAAATGGACGCCAGCAAAGGAGCCTTTCAATACCAAATGGTACTCATGCATCTCCATATCACCATCAGTATCCCCAACAATCACCAAAACCCAAAGCCAAAGCATAG 1404 0.4402 MGLGAENGKVVESKWRRKKKKKKIEDEEKSGCWVRLRFMGSCISSRSKVDSSVSGTSTHYGTESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDNQRLLVYEFMARGSLENHLFRRSLPLPWSIRMKIALGAAKGLTFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPYLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLNRDPKARPLMSEVVEALKPLPNLKDMASSLYYFQTMQADRFRASPNTRNGRQQRSLSIPNGTHASPYHHQYPQQSPKPKAKA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi287g00007 467 MobiDBLite consensus disorder prediction 1 28 - -
Gabi287g00007 467 MobiDBLite consensus disorder prediction 428 467 - -
Gabi287g00007 467 MobiDBLite consensus disorder prediction 428 457 - -
Gabi287g00007 467 CDD STKc_IRAK 128 405 - -
Gabi287g00007 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Gabi287g00007 467 PANTHER OS01G0588500 PROTEIN-RELATED 84 405 - -
Gabi287g00007 467 Pfam Protein tyrosine and serine/threonine kinase 127 402 IPR001245 GO:0004672|GO:0006468
Gabi287g00007 467 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Gabi287g00007 467 FunFam Serine/threonine-protein kinase BIK1 89 207 - -
Gabi287g00007 467 MobiDBLite consensus disorder prediction 45 94 - -
Gabi287g00007 467 ProSiteProfiles Protein kinase domain profile. 122 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi287g00007 467 Gene3D Phosphorylase Kinase; domain 1 81 207 - -
Gabi287g00007 467 Gene3D Transferase(Phosphotransferase) domain 1 208 421 - -
Gabi287g00007 467 SUPERFAMILY Protein kinase-like (PK-like) 108 428 IPR011009 -
Gabi287g00007 467 FunFam Probable serine/threonine-protein kinase PBL8 208 423 - -
Gabi287g00007 467 MobiDBLite consensus disorder prediction 45 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi287g00007 Gabi-Chr287 115446 120034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi287g00007 69 418 Glycoside Hydrolase AT3G07070 51.412 1.73e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi287g00007 PK_Tyr_Ser-Thr 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi287g00007 - - qsa:O6P43_025413 813.527