Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2877g00037 ATGCCTAGCTCATTCCTTGGGAAGATACAAAAGGGTCTTTCACTCTTTGCACACAGAAGGCCTGAACTAAGGTACTTCAACGAAGATCTTGTGGAAGCCACAACTGTGATGCCAGATGATGTTAGGGAAGGATATTTTTCTGTTCTTGCAATCAAGGATGGAGAATCCAAAAGGTTCATTGTTGAGTTAAACTACTTGACTGATCCTTCATTCTTGGGACTACTCGACCAAGCTCAGGAAGAGTATGGTTTCGGACAGCAGGGAGCTCTAGCAGTCCCTTGTCGACCTCAAGAATTACAGAAGATTCTAGATGGTCTCAGAGAGTAG 327 0.4404 MPSSFLGKIQKGLSLFAHRRPELRYFNEDLVEATTVMPDDVREGYFSVLAIKDGESKRFIVELNYLTDPSFLGLLDQAQEEYGFGQQGALAVPCRPQELQKILDGLRE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2877g00037 108 Pfam Auxin responsive protein 36 104 IPR003676 GO:0009733
Gabi2877g00037 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2877g00037 Gabi-Chr2877 373191 373517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2877g00037 38 103 Calmodulin-binding Proteins AT3G43120 40.909 7.45e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2877g00037 - K14488 gmx:106795483 155.606