Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2877g00027 ATGAACTCCGAAATTGTTCCATACACATTTTCACATTCAGACCCTAAAATCACAACCGATTCTGACCCCAATGTGCAAATCACAGCCACACCAAAACCTTCAGCCGCTGCCAGAAAAAAATCTTCCGCCGCAGTCGCCATTCGCTCCACGAAGGACCGCCACACCAAGGTTAACGGCCGTGGCCGCCGTGTCCGCATGCCGCCGCTCTGCGCTGCCCGGATATTCCAGCTCACCCGCGAGCTCGGCCACCGCTCCGATGGCGAGACAATCGAGTGGCTTCTCCGCCAGGCTGAGCCCTCCATAGTAGCCGCCACAGGTTCCGGCACCGTACCTGCCGCTCCAGTTTCATCCTTCGCCGACGCCGTCGCCTCCTCGGCGCCCTCCATCTCTTGCCTTGCTCTGCCCGCGCCGGAGACTACTGGCGGTGGCCATGAGATGTTCGCCTTGGCTCTGCCGCAGCCGGCAGTAACGGAGTACGCGGCGGCGGCGGTGAACGGATACCGACACATGCCGTTCACGGCGCTGTTGTTGCAACCTACGACGGCGGAGGATAATCAGCAAGAGGAGACTCTCAACGAACTATGA 585 0.6034 MNSEIVPYTFSHSDPKITTDSDPNVQITATPKPSAAARKKSSAAVAIRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIVAATGSGTVPAAPVSSFADAVASSAPSISCLALPAPETTGGGHEMFALALPQPAVTEYAAAAVNGYRHMPFTALLLQPTTAEDNQQEETLNEL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2877g00027 194 Pfam TCP family transcription factor 49 152 IPR017887 -
Gabi2877g00027 194 MobiDBLite consensus disorder prediction 1 31 - -
Gabi2877g00027 194 MobiDBLite consensus disorder prediction 1 60 - -
Gabi2877g00027 194 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 126 IPR005333 GO:0003700
Gabi2877g00027 194 ProSiteProfiles TCP domain profile. 50 104 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2877g00027 Gabi-Chr2877 270755 271756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2877g00027 50 181 TCP Transcription Factor Family AT2G37000 57.576 2.41e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2877g00027 TCP 5.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2877g00027 - - aprc:113870815 226.868