Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2877g00023 ATGAGGAACAATGCTTCCACCTCGGTCGCTCTCGTTCTGTTCTTATTCTCTTTCGCGTTTTTGAGTCTGCCACCACGGATTCAATGCGCGGATAGCACTTTTGCCCCTTCTTTTTACACTGAAGAAATCTATAAGGAGCTTCAAAATCTTGCTACCCTTTTAAACAGGGACATCAAAACAAGTTTAGGCTTCTGCATCAAGGATGTGAAAAAAGATTGGGTGGAAGCATTTGACTTTGAGGAAAAGTTGGATTTCGTGGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGAGATCGAATATGTACTGCAACTGAAATAAGGTACTACTTCCACGGTTTCTTGGAACAGGGGGCATCATCTTCCAATTACGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGTTGGGGTTGTAGTGCGGGCAAGAGTATTGACCTCAAAAAGGACATAAAGGAAATTCCTTATAGAACTGATAACTGTCAACCTTGTTGTGAGGGCTTTTTTTGCCCTCAGGGATTGACATGCATGATACCTTGCCCACTAGGCTCTTATTGTCCACTTGCAAAACTGAACAATGAGACTGGAATTTGTGACCCATATAGTTATCAGATACCTCAGGGAGAAACAAATCATACTTGTGGCAGTGCTGATATTTGGTCTGGCATGGTAAACAATAGTGATATCTTCTGTTCTCCGGGATCATACTGCCCAACTACAACACGTAAAGTCTCTTGTGATAGTGGATACTACTGCAGGATGGGCTCTACTCACCAAAATCCATGCTCCAAGTTGAGTACCTGTAATCCAAGCACAGCAAACCAAAATATGCATGCTTATGGCGCTTTGCTTATTGTTGCATTGAGTACTATCTTGATCATCATTTATAACTGTTCTGATCAAGTTCTAGCTACTCGAGAAAGAAGGAAGGCTAAATCTAGGGAAGCTGCAGCAAGACAAGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAAATAGCTAAAGATATTGCTAAGAAGGGTAAGCCGGGATTGCAAGAGCAGTTATCCCGCACCTTTTCTCGCAGAAAATCAGTAAAGCAAGCGGAGCAATCTAAGGTTTTTAGTCAAGCAAAACCTGCTATGGGCAGTACTCTTTTGCCACCTGTGCCTCCAGGTTCTTCAAGCACATCTCAGGAGTCATCTGCAGCTTCAAAAGCCCCAAACAATGAACCTAGTAACCTTACTAAAATGTTGAATTCCTTTGAGAATGACCCAAATAGCAATGAAGGATTCAATCTGCAGATTGGAGATAAAAATATTAAAAAGCAGATGCCAAAAGGCAAACAGTTGCATACGCAAAGCCAAATTTTAAGGTATGCTTACGGTCAGATTGAGAAGGAGAAAGCTCAACAAGAGAAGAACAAGAACTTGACTTTCTCGGGAGTGATTTCAATGGCTACTGAAGGTGATGTTAGAACAAGGCCTGTGATTGAGGTAGCTTTCAAAGATTTAACTCTCACTTTGAGTGGAAAAAGAAAACATCTACTGAGGTGTGTGACCGGTAAAATCATGCCTGGTCGAGTCTCAGCTGTGATGGGTCCCTCAGGAGCTGGAAAAACTACATTTCTTTCTGCTTTGGCGGGTAAAGCAAGAGGATGCACTATGACAGGTTCAATTCTAATCAATGGAAAACCCGACTCCATTCACTGTTATCAGAAAATTATTGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTGTCTGCGGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTGGGGCTCCAGGCAGTGAGAGATTCCCTTGTTGGGACTGTAGAGAAGCGAGGTATATCTGGAGGGCAACGCAAACGTGTAAATGTAGGGCTGGAGATGGTTATGGAGCCTTCGTTGTTAATCTTAGATGAGCCTACAACTGGTTTGGACAGTGCATCTTCCACTTTACTGCTTAAAGCACTTCGTCGCGAAGCTCTTGAGGGGGTAAACATCTGCATGGTACTTCACCAACCAAGCTATACCTTGTTCAAAATGTTTGATGACATAATATTTCTAGCCAAAGGTGGCCTTACTGCATATCACGGTCCTGTTAAAAAAGTAGAAGAATACTTTGCTGGTATTGGAATCCCTGTGCCTGATCGAGTGAATCCTCCAGACCATTTCATTGACATTCTGGAAGGTTTAGTAAAACCAAGTTCAGGTGTGACTTATCAACAGCTTCCTGTCAGATGGATGCTTCATAATAGTTACCCAGTACCACCAGATATGCTTCATTATATTGATCAAATTGCTGCTTCATCATCTTCCTCAAATATAAATGATGCAACAACAAAGGGTACTGAAGAAGCTGCTGATCGATCCTTTGCTGGTGAGTTTTGGGAGGACATGAAGAGTAATGTTCAGAGCCAACGAGATCATATAGAGGCAACCTTCTTAAAGACTAAGGACTTATCTAACCGAACGACTCCTGGTGTATCCTGGCAATATCGATACTACCTTGGGCGGATTGGTAAGCAGCAGCTGCGGGAAGCAAAATCACAAGCAGTTGACTATCTCCTTTTATTAGTTGCTGGTGCTATCTTAGGAACTCTTACTAAAGTAAATGATGAAACATTTGGGTCCCTTGGGTATACATATACTGTCATTGCTGTCTCTCTACTTTGCAAGATTGCAGCTCTCAGATCATTTTCTCTGGATAAATTACAGTACTGGAGGGAGTCTGCATCCGGGATCAGTAGTCTGGCTCATTTTTTGGCCAAAGATACAATTGATCTTTTCAATACAATCATCAAACCTGTGGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGCTTTGGAAGTAATTATGTGGTTTTGCTCTGCCTTGTGTATTGTGTTACTGGCATGGCTTATGCATTAGCAATTTACTTTGAGCCTGCTCCAGCACAGCTGGGGTCTGTGCTTCTCCCTGTTGTTATGACTCTCATTGCAAACCAGAAAAGAGATACTACCCTTATGAAGATCCTAGTAAAATTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCAGAAAGGTACACTGGCGTGTGGCTGATAACTCGTTGTAGTTCACTGATGAATAATGGCTATGATGTCAGTGATTGGCCTATTTGTCTGATTGTCCTCATTTTGTATGGTATAATTGCCCGAGTTGTGGCCTATTTTTGTCTAGTGATCACCCTAAAGAAGTGA 3318 0.418 MRNNASTSVALVLFLFSFAFLSLPPRIQCADSTFAPSFYTEEIYKELQNLATLLNRDIKTSLGFCIKDVKKDWVEAFDFEEKLDFVDSCVKKKGDFRDRICTATEIRYYFHGFLEQGASSSNYVKPNKNCNLTSWVSGCEPGWGCSAGKSIDLKKDIKEIPYRTDNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNETGICDPYSYQIPQGETNHTCGSADIWSGMVNNSDIFCSPGSYCPTTTRKVSCDSGYYCRMGSTHQNPCSKLSTCNPSTANQNMHAYGALLIVALSTILIIIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKIAKDIAKKGKPGLQEQLSRTFSRRKSVKQAEQSKVFSQAKPAMGSTLLPPVPPGSSSTSQESSAASKAPNNEPSNLTKMLNSFENDPNSNEGFNLQIGDKNIKKQMPKGKQLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGDVRTRPVIEVAFKDLTLTLSGKRKHLLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKPDSIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFKMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPSSGVTYQQLPVRWMLHNSYPVPPDMLHYIDQIAASSSSSNINDATTKGTEEAADRSFAGEFWEDMKSNVQSQRDHIEATFLKTKDLSNRTTPGVSWQYRYYLGRIGKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFLAKDTIDLFNTIIKPVVYLSMFYFFSNPRSSFGSNYVVLLCLVYCVTGMAYALAIYFEPAPAQLGSVLLPVVMTLIANQKRDTTLMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNNGYDVSDWPICLIVLILYGIIARVVAYFCLVITLKK 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2877g00023 1105 ProSitePatterns ABC transporters family signature. 640 654 IPR017871 GO:0005524|GO:0016887
Gabi2877g00023 1105 Gene3D - 490 734 IPR027417 -
Gabi2877g00023 1105 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 499 740 IPR003439 GO:0005524
Gabi2877g00023 1105 MobiDBLite consensus disorder prediction 342 430 - -
Gabi2877g00023 1105 CDD ABCG_EPDR 497 723 - -
Gabi2877g00023 1105 Pfam ABC transporter 519 667 IPR003439 GO:0005524
Gabi2877g00023 1105 MobiDBLite consensus disorder prediction 388 430 - -
Gabi2877g00023 1105 Pfam ABC-2 type transporter 697 1104 IPR043926 GO:0140359
Gabi2877g00023 1105 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 241 1094 - -
Gabi2877g00023 1105 FunFam ABC transporter G family member 24 493 735 - -
Gabi2877g00023 1105 SMART AAA_5 525 717 IPR003593 GO:0016887
Gabi2877g00023 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 722 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2877g00023 Gabi-Chr2877 203532 216636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2877g00023 493 700 Calmodulin-binding Proteins AT2G36910 27.230 2.26e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2877g00023 - - gmx:100780238 1929.07