Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2877g00010 ATGAAGTCCTCAAGATTTCTAAGAGGGTGCCTTAACAAGTGCAAGAAAATGGGGAGTGAAGTCATAACTTGTGCTGCTTGTAAGTATTGTTGTGAATGGGCTTTGTGGTCTTCTTTGCATAAAAGTTGTTCCATTCCAAGCGATGTTCCAAAGGGTCACTTGGTTGTCTATGTAGGTGAAAACCGCAAGAGATTTGTGATAAAGATTACATTGCTCCATCATCCACTATTCAGGGCCTTGCTGGATCAAGCTCAGGAAGAATATGATTTCATTGCAGATTCAAAACTCTGTATTCCTTGTGATGAGCATATCTTCCTCAGTATCCTTCGCTGTGCAAGCTCTTCAAAGAACCAACGATTGTGTCAGTGA 369 0.4119 MKSSRFLRGCLNKCKKMGSEVITCAACKYCCEWALWSSLHKSCSIPSDVPKGHLVVYVGENRKRFVIKITLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHIFLSILRCASSSKNQRLCQ 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2877g00010 122 Pfam Auxin responsive protein 42 111 IPR003676 GO:0009733
Gabi2877g00010 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2877g00010 Gabi-Chr2877 173125 173493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2877g00010 11 119 Calmodulin-binding Proteins AT4G34750 42.982 8.51e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2877g00010 K14488 - gmx:100812927 203.756