Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2874g00016 ATGATAATAAAAAGCTCTGCCTCTGCAAGTGCAACATGTGTCAGTGCCCCTATCCCTTATCCATCATGTAACAACATGTTTGCAACTTGTTCAGCAGCATCTAAAATTACAAGAAGACCTCTATCTCTGTCTCTCATCTCTACCACCTTCTCTGCTTTCATCTTCTCACTTCCTTCTCCTCCTTCCTCTTCTTCTCCCTCTCCTTCTCCAAAATACCCCATATCAGACTTCTTTGAGCTCCCAAATTCTGGTGGTGTTAAGGCTTTGGACCTCCTTGTTGGTTCAGGTGAAGTTCCCGCAGATGGGGACCAGGTTGCAATTCACTACTATGGTAGACTGGCAGCAAAACAAGGATGGCGCTTTGACTCAACCTATGACCACAAAGATGACAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGCACTGGCAAGGTTATTGCTGGAATTGATGTGGCAGTGAGATCAATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCCCTTGGGTATCAAAATACATCACAGGAGCCCATCCCACCTAATAAAAAAGTTCTTTGA 567 0.4409 MIIKSSASASATCVSAPIPYPSCNNMFATCSAASKITRRPLSLSLISTTFSAFIFSLPSPPSSSSPSPSPKYPISDFFELPNSGGVKALDLLVGSGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGDPNPFVFVLGTGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNKKVL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2874g00016 188 Gene3D - 75 188 IPR046357 GO:0003755
Gabi2874g00016 188 SUPERFAMILY FKBP-like 83 187 - -
Gabi2874g00016 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 188 IPR001179 GO:0003755
Gabi2874g00016 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 11 184 IPR044197 -
Gabi2874g00016 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 187 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2874g00016 Gabi-Chr2874 273644 277072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2874g00016 61 184 Calmodulin-binding Proteins AT5G48570 36.000 5.44e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2874g00016 - - gmx:100808927 270.011