Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2874g00015 ATGATAATAAAAAGCTCTGCCTCTGCAAGTGCAACATGTGTCAGTGCCCCTATCCCTTATCCATCATGTAACAACATGTTTGCAACTTGTTCAGCAGCATCTAAAATTACAAGAAGACCTCTATCTCTGTCTCTCATCTCTACCACCTTCTCTGCTTTCATCTTCTCACTTCCTTCTCCTCCTTCCTCTTCTTCTCCCTCTCCTTCTCCAAAATACCCCATATCAGACTTCTTTGAGCTCCCAAATTCTGGTGGTGTTAAGGCTTTGGACCTCCTTGTTGGTTCAGGTGAAGTTCCCGCAGATGGGGACCAGGTTGCAATTCACTACTATGGTAGACTGGCAGCAAAACAAGGATGGCGCTTTGACTCAACCTATGACCACAAAGATGACAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGCACTGGCAAGGTTATTGCTGGAATTGATGTGGCAGTGAGATCAATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCCCTTGGGTATCAAAATACATCACAGGAGCCCATCCCACCTAATTTCTTTGACAGGCAGAGGCTTTTCACTACCATTTTTAATCCAACTCGCCTTGCAAATGGAGAAGGCTCCACTTTAGGGACACTTGTATTTGATATTGAACTGGTTAGCCTGAGGCATCAGTGA 675 0.4444 MIIKSSASASATCVSAPIPYPSCNNMFATCSAASKITRRPLSLSLISTTFSAFIFSLPSPPSSSSPSPSPKYPISDFFELPNSGGVKALDLLVGSGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGDPNPFVFVLGTGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLVFDIELVSLRHQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2874g00015 224 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 222 IPR001179 GO:0003755
Gabi2874g00015 224 Gene3D - 75 221 IPR046357 GO:0003755
Gabi2874g00015 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 11 224 IPR044197 -
Gabi2874g00015 224 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 219 IPR001179 GO:0003755
Gabi2874g00015 224 SUPERFAMILY FKBP-like 83 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2874g00015 Gabi-Chr2874 273644 277084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2874g00015 61 222 Calmodulin-binding Proteins AT5G48570 31.902 7.44e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2874g00015 - - gmx:100808927 345.125