Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2873g00005 ATGGATAATTATGGGTCATCTTCTTCTCCATATCGTTATCCAAACCCATATGTGTACCCTCCTAACCCTCATCCACCATACCAGCCTATAGCTCCAGGTCCTGATCCATATGCACATGTTCCTTATGCATATCCTTATAGTTCTTCACATTCCTTCAACTATTCCTACCCTAGATCACCCTTATCATCCTCCAATTCTGGTTCATTCAAGTATTCTTACCCTCCTCCTCCTCCTCAATCACCCTCCTCAGCCCCATTTAACCACCCTCCTCCTCCCCAATTGGACTTTCCCCAGCCTCTTCCAGCTTATCCTTATCCCTACCATGTTCCTCCTCAAGGGACTCATGGTTCTCCTAGGCCTTCCCTTTCAAACCATGGTAGTTTTCAACATGGTTCATCTCATCACTATTATCAACAAAATGAGGCCTATTCTTCTCATGGAGACCCTCCTGATGCGCATTTGCGTGCCAATAGCTTCTCTGGCCCTTACTGGCAGGAGACAACAAGCTCCACAGGTGGAGTAGCAGCACAAAGTAGTGATAATTCCAAGCCTTCTAAGAGTTCTGCTTACCCTCCTTTGGATGATCTTATGAGCAGTGTTCGGTTGTCTGATAACATGCCAACTGCTCCTGCATCACCCCTTGCACCTGCAGCGCAACCACTGATGTATTCCATTTCAGTTCCAAAGTTACAGCAGAAGAGAGAGGACTTTTATGGATATTCAAATAACTCCTTTTCGGGTTGGGGATCCTCCTACCCTGGTCAGGTGGATTCATCTAGGCTTTCAGATTATTCAGGCTCATTTAATAATTCAGTGCATGGCCAGAGAATGCAGATTGTTCCAATACAGAATAAAGGATCCTTGAGAGTTTTGCTCCTACATGGGAATTTAGATATATGGGTTCATGAAGCCAAAAATCTCCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAAATCGAAGGAACTATGAATAGGAAGATTACCAGTGATCCTTATGTAACAATTTCAGTATCAAATGCTGTACTTGGGAGGACTTTTGTCATTAGCAACTGTGAAAATCCTGTCTGGATTCAACATTTCTATGTTCCCGTTGCACATCATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTGGTGGGTTCACAACTCATTGGCATTGTGGCAATTCCAGTTGAACAAATATACTCAGGGGAAAAAGTTGAAGGAACATTTCCTATCCTGAATAATAATGGGAAACCTTGTAAGCAAGGACCTGAATATATTGGGGTTCCTGGTACATATTTTCCTTTGAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCTCATATTCCAGATGGAAGCCTCCCCAATGTGTTGCTTGACAATGGGTTGTATTATGTCCATGGACAGTGTTGGATTGACATCTTTGATGCCATAAGACAAGCTCAGCGTTTGATTTACATTACAGGGTGGTCAGTGTGGCACAAAGTTAGGTTGATAAGGGATGCTTCTGATAATGCATCAGATTATAACTTGGGTGATCTTCTGAGGTCAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACGTCAAGAAGCATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGAAGATTTTTCAAGCATTCTTCAGTACATGTGCTGCTTTGTCCTCGCATTGCTGGAAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACAATATATACGCATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTCGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTCTTTAGGACATTGCAGACAATACATAAAGATGACTATCACAACCCTACTTTCACGGGTAATATTGGTGGTTGTCCAAGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGTATAAAAAAGTTGAAAATTTCATATGATGATGCTTTGCTTAGGCTGGAAAGAATTCCAGATGTTATTGGCATGAATGATGCTCATTATGTTGGTGATGATGATCCTGAAGCTTGGCATGTTCAGATATTTCGTTCAATTGATTCGAATTCTGTTAAGGGATTTCCAAAGAATCCAAAAGAAGCAACTAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCATTATATTTATATAGAGAATCAATATTTCATCGGGTCTTCATTCAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATAAAAGCAAATGAGAGATTCGCTGTGTATATTGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGGGCTGCCACACAAAGGATTTTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATATACAAGGCTTTGGTTGAGGTCGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGCAATCGAGAGGTCATAAATATGCATGACAATTTCAATGTGTCAGGATCTCCTCCCCCAGCAAATAGTCCACAAGTATCTAGTCGAAATAGCCGGCGTTTCATGATTTATGTTCATTCAAAAGGAATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAATATCAACCAACGCTCTATGGAAGGCACGAGGGACAGTGAGATTGCAATGGGAGCCTACCAACCTCATCATACTTGGGCAAGAAAGCAATCTTATCCACATGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACACACAGGAACCATTGAAGACTGCTTCTTGCAACCTGAGAGCCTTGAATGTGTGCGAAGGGTTAGAGCAATGGGTGAGGTTAACTGGAACCAATTTTCAGCAAATGATATAACAGAGATGAGAGGGCATCTACTCAAATACCCAGTAGAAGTTGATCGGAAAGGCAAAGTTAGATCCCTTCCTGGCCAAGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTTGGATCATTTCTTGCCATGAAGGAGAATCTAACCATTTGA 3258 0.4147 MDNYGSSSSPYRYPNPYVYPPNPHPPYQPIAPGPDPYAHVPYAYPYSSSHSFNYSYPRSPLSSSNSGSFKYSYPPPPPQSPSSAPFNHPPPPQLDFPQPLPAYPYPYHVPPQGTHGSPRPSLSNHGSFQHGSSHHYYQQNEAYSSHGDPPDAHLRANSFSGPYWQETTSSTGGVAAQSSDNSKPSKSSAYPPLDDLMSSVRLSDNMPTAPASPLAPAAQPLMYSISVPKLQQKREDFYGYSNNSFSGWGSSYPGQVDSSRLSDYSGSFNNSVHGQRMQIVPIQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNRKITSDPYVTISVSNAVLGRTFVISNCENPVWIQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEKVEGTFPILNNNGKPCKQGPEYIGVPGTYFPLRKGGTVTLYQDAHIPDGSLPNVLLDNGLYYVHGQCWIDIFDAIRQAQRLIYITGWSVWHKVRLIRDASDNASDYNLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTIHKDDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGMNDAHYVGDDDPEAWHVQIFRSIDSNSVKGFPKNPKEATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEVGLEAAFSPQDYLNFFCLGNREVINMHDNFNVSGSPPPANSPQVSSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRAMGEVNWNQFSANDITEMRGHLLKYPVEVDRKGKVRSLPGQEEFPDVGGKIVGSFLAMKENLTI 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2873g00005 1085 PANTHER PHOSPHOLIPASE D 285 1076 IPR015679 -
Gabi2873g00005 1085 MobiDBLite consensus disorder prediction 55 70 - -
Gabi2873g00005 1085 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 426 IPR035892 -
Gabi2873g00005 1085 MobiDBLite consensus disorder prediction 55 215 - -
Gabi2873g00005 1085 MobiDBLite consensus disorder prediction 71 113 - -
Gabi2873g00005 1085 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 596 631 IPR001736 GO:0003824
Gabi2873g00005 1085 Pfam Phospholipase D Active site motif 597 631 IPR001736 GO:0003824
Gabi2873g00005 1085 Pfam Phospholipase D Active site motif 932 958 IPR001736 GO:0003824
Gabi2873g00005 1085 SMART pld_4 931 958 IPR001736 GO:0003824
Gabi2873g00005 1085 SMART pld_4 596 631 IPR001736 GO:0003824
Gabi2873g00005 1085 MobiDBLite consensus disorder prediction 160 188 - -
Gabi2873g00005 1085 Gene3D Endonuclease Chain A 741 986 - -
Gabi2873g00005 1085 ProSiteProfiles C2 domain profile. 273 419 IPR000008 -
Gabi2873g00005 1085 FunFam Phospholipase D delta 471 710 - -
Gabi2873g00005 1085 SUPERFAMILY Phospholipase D/nuclease 467 696 - -
Gabi2873g00005 1085 CDD C2_plant_PLD 290 433 - -
Gabi2873g00005 1085 SMART C2_3c 296 418 IPR000008 -
Gabi2873g00005 1085 FunFam Phospholipase D delta 290 436 - -
Gabi2873g00005 1085 Pfam Phospholipase D C terminal 1005 1075 IPR024632 -
Gabi2873g00005 1085 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 931 958 IPR001736 GO:0003824
Gabi2873g00005 1085 SUPERFAMILY Phospholipase D/nuclease 765 1017 - -
Gabi2873g00005 1085 Pfam C2 domain 295 421 IPR000008 -
Gabi2873g00005 1085 Gene3D C2 domain 290 430 IPR035892 -
Gabi2873g00005 1085 Gene3D Endonuclease Chain A 475 710 - -
Gabi2873g00005 1085 FunFam Phospholipase D 744 977 - -
Gabi2873g00005 1085 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2873g00005 Gabi-Chr2873 21194 30050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2873g00005 18 1085 Phospholipase D Gene Family (Wang group) AT2G42010 64.898 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2873g00005 K01115 - gmx:100791059 1818.9