Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2873g00001 ATGCTTCTCTTTCTTCATTTTTTTGCAGGCATCATGATATTTAAGATGATACAGTACCTATTCCTGGCTTTTATGGTGACATATTCAGTGGCTCTCACGGTCCAACAGACATACATAGTACACATGGACAAGACAAAAATTAGAGCCTCAATTCACTCTCAAGACAGCACAAAACCATGGTATGAATCAGTTTTTGATTTCATTTCTGAAGCTTCAACAGAAGAAGAAGAAGAAGAAGAAGAGATTTTAGCCCCTCAGCTCCTTTATGTCTATGAAACCAGCATGTTTGGTTTTGCTGCCCAGCTTTCAGATAAACAACTTCAATACTTGAACCAAGTGGATGGTTTCCTTTCAGCCATGCCTGATGAACTAATAACCCTTCACACAACATACACCCCACATTTTCTTGGCCTAAGGAATGGAAGAGGACTTTGGGGTGCTCCTAACTTGGCCTCAGATGTGATCATTGGGGTACTTGATTCAGGGATATGGCCTGAACACATCAGTTTCCAAGACTCAGGTTTGTCCCCAGTACCCCATCACTGGAAAGGTGTTTGTGAACAAGGCACCAAGTTCTCAGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAGCCTATTTCAAGGGGTATGAAAAATCTGCTGGAAAAATCAATGAAACAACGGATTATCTTTCCCCTAGAGATTCTCAAGGGCATGGAACACACACTGCCTCAACTGCATCTGGTGATATGGTAAAAAATGCCAGCTTTTTTGGCCTGGCTAGAGGCTCTGCAAGTGGAATGAGGTATACCTCAAGAATTGCAGCTTATAAAGTATGCTGGCATTCTGGTTGTGCTAATTCTGACATATTAGCAGCCATGGACCAAGCAGTTTCTGATGGGGTTGATGTATTGTCACTCTCTTTAGGGAGCATTCCCAAACCTTATTATGGTGATAGTATTGCCATAGCCTCATTTGGAGCAATCCAAAATGGGGTTTTTGTTTCTTGCTCTGCAGGTAATTCAGGCCCCTTTGAATCAACAGTTGGAAATGGTGCACCATGGATCATGACAGTTGCTGCTAGCTACAATGACAGAAGCTTTCCAACAAAAGTAAAGCTTGGGAATGCAAAAACTTTTAAAGGGTCATCTTTATATCAAGGCAAGCAAACAAATCAATTGCCTCTTGTATATGGCAAATCAGCAGGTACAAAAACAGAAGCACAGTATTGCACCAAAGGCTCACTTGTTTCAAAGCTTGTGCATGGGAAAATAGTGGTTTGTGAAAGAGGAATAAATGGTAGAACTGAAAAGGGAGAGGTAGTTAAAATGGCAGGTGGGGCAGGAATGATACTACTTAACTCTGAAAGTCAAGGAGAAGAGCTTTTTGCTGACCCTCACATTTTGCCTGCAACTTCCTTAGGGTCTTCAGCTGGTAAGGTTATTAGGAGCTACATTAACTCAGTAAAAAGACCAACAGCTTCAGTTTCCTTTTTAGGGACAAGTTATGGTGATCCTGCACCAGTAATGGCAGCATTTTCTTCTAGAGGACCAAGTGCAGTAGGACCAGATGTGATTAAACCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCTCCCAAAACTAGCCCAAGCTCGCTCATAAGTGACAAAAGAATTTCACTGTTTAACATAGTCTCAGGTACCTCAATGTCTTGCCCTCATGTTAGTGGCATAGCAGCACTGCTTAAATCAGTGCACAAAGATTGGTCTCCTGCAGCTATCAAATCTGCTATGATGACCACTTCTTACACATTGAACAATAAAGGAGTTCCAATTTCAGACATTGGTTCAAATAACTCAGCCTTTGCTAACCCCTTTGCATTTGGTTCAGGCCATGTTAACCCTGAAAGTGCTTCTGATCCTGGGTTAGTCTATGATATAAGCACCATAGACTATTTGAATTACTTATGCAGCCTAAACTATACTTCTTCCCAGATTTCTTTATTATCAAAAGGTAACTTTGTATGTCCTAAAAAAACTCTTCTTCAAGCTGGTGACTTGAACTACCCTTCATTTTCTGTTCTATTTAGCACAAGTGCTCTACATGCTAGTGTGACATACACAAGGGTTGTCACAAATGTTGGAAAATCACAAAGTGCTTATGAAGTTAAAGTGGAACAACCAAATGGAGTTTCAGTAACTGTTGAACCAAGGAAATTGAAGTTTGAAAAACTGGGTCAGAAATTGAGCTACAATGTGACATTTTCTGCACTTGGAAGAGCAAGAGCTGTGGGTATCTCAACATTTGGGTCACTGATTTGGGTATCTGACAAATATAAGGTTAGAAGTCCTATAGCAGTAACATGGCAATAA 2346 0.4096 MLLFLHFFAGIMIFKMIQYLFLAFMVTYSVALTVQQTYIVHMDKTKIRASIHSQDSTKPWYESVFDFISEASTEEEEEEEEILAPQLLYVYETSMFGFAAQLSDKQLQYLNQVDGFLSAMPDELITLHTTYTPHFLGLRNGRGLWGAPNLASDVIIGVLDSGIWPEHISFQDSGLSPVPHHWKGVCEQGTKFSASNCNKKLIGARAYFKGYEKSAGKINETTDYLSPRDSQGHGTHTASTASGDMVKNASFFGLARGSASGMRYTSRIAAYKVCWHSGCANSDILAAMDQAVSDGVDVLSLSLGSIPKPYYGDSIAIASFGAIQNGVFVSCSAGNSGPFESTVGNGAPWIMTVAASYNDRSFPTKVKLGNAKTFKGSSLYQGKQTNQLPLVYGKSAGTKTEAQYCTKGSLVSKLVHGKIVVCERGINGRTEKGEVVKMAGGAGMILLNSESQGEELFADPHILPATSLGSSAGKVIRSYINSVKRPTASVSFLGTSYGDPAPVMAAFSSRGPSAVGPDVIKPDVTAPGVNILAAWPPKTSPSSLISDKRISLFNIVSGTSMSCPHVSGIAALLKSVHKDWSPAAIKSAMMTTSYTLNNKGVPISDIGSNNSAFANPFAFGSGHVNPESASDPGLVYDISTIDYLNYLCSLNYTSSQISLLSKGNFVCPKKTLLQAGDLNYPSFSVLFSTSALHASVTYTRVVTNVGKSQSAYEVKVEQPNGVSVTVEPRKLKFEKLGQKLSYNVTFSALGRARAVGISTFGSLIWVSDKYKVRSPIAVTWQ 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2873g00001 781 Gene3D - 359 497 - -
Gabi2873g00001 781 FunFam Subtilisin-like protease SBT1.5 153 376 - -
Gabi2873g00001 781 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Gabi2873g00001 781 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Gabi2873g00001 781 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Gabi2873g00001 781 Pfam Peptidase inhibitor I9 37 128 IPR010259 -
Gabi2873g00001 781 SUPERFAMILY Subtilisin-like 127 634 IPR036852 GO:0004252|GO:0006508
Gabi2873g00001 781 CDD PA_subtilisin_like 366 490 - -
Gabi2873g00001 781 CDD Peptidases_S8_3 126 594 IPR034197 -
Gabi2873g00001 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Gabi2873g00001 781 ProSiteProfiles Serine proteases, subtilase domain profile. 130 630 - -
Gabi2873g00001 781 Pfam Subtilase family 152 601 IPR000209 GO:0006508|GO:0008236
Gabi2873g00001 781 FunFam subtilisin-like protease SBT1.5 359 497 - -
Gabi2873g00001 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 778 IPR045051 -
Gabi2873g00001 781 Gene3D Peptidase S8/S53 domain 153 643 IPR036852 GO:0004252|GO:0006508
Gabi2873g00001 781 Pfam PA domain 389 474 IPR003137 -
Gabi2873g00001 781 FunFam Subtilisin-like protease SBT1.5 647 781 - -
Gabi2873g00001 781 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Gabi2873g00001 781 Gene3D - 647 780 - -
Gabi2873g00001 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 128 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2873g00001 Gabi-Chr2873 10438 12783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2873g00001 35 781 Subtilisin-like Serine Gene Family AT1G01900 56.208 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2873g00001 - - gmx:100790006 1265.37