Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi286g00005 ATGAGTTGCAACGGTTGTCGAGTTCTTAGAAAGGGTTGCAGCGAATCATGTATTTTGCGCCCTTGTTTGCAATGGATCGAAAGCCCAGAAGCTCAAGGCCACGCAACCGTTTTCGTAGCCAAATTCTTTGGTCGTGCTGGCCTCATGTCCTTCATTTCTAATGTCCCCGAAACCCAAAGACCTTCTTTGTTTCAGTCTCTGCTGTTCGAAGCGTGCGGAAGAACGGTGAATCCGGTGAACGGAGCCGTTGGACTTTTGTGGACCGGAAACTGGCACGTGTGCCAGGCGGCGGTGGAGACGGTGCTCCGCGGCGGCACGTTGAAGCACATGCCGGAGCTTATCGGTCTGGATTCTCCTGCTGCGGTCACCGACGAGGCGTCGGAGGTTGAAGTCGCCTGCACGGACATTTGGAGGATCCGAGATCCGAACCCGAATTTCCGGTTCACGAACTCGCGATCTAATAATAATAGTAATAAGGTCTCTGCCGGAGGAAAACGCAAGCGACCGGAGGAGTTGTCGAAGCTTCAGGCGGCGACCAATCTTGATCTCCGACTGACGCCGATTTTTTTGCAGAAAGTTTCGGAGAACCGCCGGCCGGGATCGCCGTCGATGACGTCGGAGGAATCCGTGACGACGACGGCGTGCTTGGAAAGCGGGATCGGAGACCGGAAAGTTCTCAACCTTTTCATTTGA 693 0.544 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISNVPETQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLKHMPELIGLDSPAAVTDEASEVEVACTDIWRIRDPNPNFRFTNSRSNNNSNKVSAGGKRKRPEELSKLQAATNLDLRLTPIFLQKVSENRRPGSPSMTSEESVTTTACLESGIGDRKVLNLFI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi286g00005 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
Gabi286g00005 230 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gabi286g00005 230 MobiDBLite consensus disorder prediction 147 170 - -
Gabi286g00005 230 MobiDBLite consensus disorder prediction 147 162 - -
Gabi286g00005 230 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi286g00005 Gabi-Chr286 113098 114454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi286g00005 1 225 AS2 family AT3G49940 60.851 3.96e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi286g00005 LOB 6.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi286g00005 - - gmx:100802764 350.132