Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi286g00002 ATGATGCAATTCACACCACCACTACCTCATCTGCACCAAATCACACCCTTTCCCAACCCTACCATGAACAAAAATCAAATTCCTAGAACAAGGCCATCATGGCCTACAGGGTTCCCAACATCCAAGGCATTAAGTAGCTTTGGCGATGCTAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATAGAAAGCAACGATGTAACTCTGGCCCAACAAATCCTTTGGGTCCTCAACAACATAGCACCCCAAGATGGTGATTCCAATCAGCGCCTAGCTTGTAGCTTCCTTCGAGCACTCACCGCTCGTGCAGCCAAAACTGGAACCTGCAAAATGCTCGTAGCAGTAGCAGCAGATACTCATAACAACCTTACCATAGACACACACAAATTCTCACTCATCGAGCTAGCCAACTTCGTTGACTTAACCCCTTTTCATCGCTTCGGTTTCACAGCTGCTAACGCAACCATTCTTGAAGCTACAGAAGGATTCTCCATCATCCACATAGTGGACTTAAGTTTGACACATTGCATGCAGATTCCAACCTTAATCGACGCCATTGCTAGCCGCCACGACGTGCCTCCTTTAATCAAGCTCACCGTAGCTTCTGCTAGCAGCAGGGACATACCACCAAATCTTAACCTTTCTTATGATGAACTAGGTGCTAAGTTGGTTAGTTTCGCTAGGTCAAGAAACATGATCATGGAATTCAGGGTGGTTTCTTCAAGTTATGAAGATGGGTTCGCAGCTTTGATCGAACACTTGAGGGTGCAACATTTAGTTTACGCTGCAGAACATCCTCAAACAGAGGCTTTGGTTATAAACTGTCACATGATGCTTCATTACATCCCTGATGAAACCCTTTCTTCTAATTATTATGTTTCTGTCACTTCAACTTCTTCCCTGCGATCTTTGTTCCTTAAAGCCCTGAGGAGTTTAGACCCAACGGTTGTCGTTTTGGTAGATGAAGATGCAGATTTAACATCTAATAACTTGGTTTCTAGATTAAGGTCTGCGTTTAATTATCTATGGATACCTTACGACACTGTGGACACGTTCCTCCCACGAGGGAGTGAACAAAGGCAGTGGTATGAAGCACACATTAGCTGGAAGATTGAGAATGTAATAGCACATGAAGGGCTTCAGAGGGTTGAAAGGGTTGAGCCTAAAAGCAGGTGGGAACAGAGAATGAGAAATGCAAACTTTAATGGGATTCCATTCAGTGAGGACAGTGTTGCGGAGGTGAAGGCTATGCTGGATGAACATGCTGCTGGTTGGGGATTTAAGAAGGAAGATGAACATATTGTGCTCACATGGAAAGGGCACAATGTTGTCTTTGCCTCTGCTTGGTTTTCTGCTTGA 1365 0.4462 MMQFTPPLPHLHQITPFPNPTMNKNQIPRTRPSWPTGFPTSKALSSFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPQDGDSNQRLACSFLRALTARAAKTGTCKMLVAVAADTHNNLTIDTHKFSLIELANFVDLTPFHRFGFTAANATILEATEGFSIIHIVDLSLTHCMQIPTLIDAIASRHDVPPLIKLTVASASSRDIPPNLNLSYDELGAKLVSFARSRNMIMEFRVVSSSYEDGFAALIEHLRVQHLVYAAEHPQTEALVINCHMMLHYIPDETLSSNYYVSVTSTSSLRSLFLKALRSLDPTVVVLVDEDADLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSEQRQWYEAHISWKIENVIAHEGLQRVERVEPKSRWEQRMRNANFNGIPFSEDSVAEVKAMLDEHAAGWGFKKEDEHIVLTWKGHNVVFASAWFSA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi286g00002 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 441 IPR005202 -
Gabi286g00002 454 Pfam GRAS domain family 53 451 IPR005202 -
Gabi286g00002 454 ProSiteProfiles GRAS family profile. 44 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi286g00002 Gabi-Chr286 46497 47861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi286g00002 29 451 GRAS Transcription Factor Family AT3G49950 60.839 3.34e-179 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi286g00002 GRAS 4.1e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi286g00002 - - gmx:100814364 711.064