Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2864g00001 ATGTCAGAGGGAGAATATGGTGATGCCATCATTCAAGGAGGGGTGTCTTTAAACTTCAATTTTCAAACTGATGATGGTGAAGTTTCATGGTCTCCAACTAATTGGGTTCTGCATGATATTAAAGGAGCTGCTGAGGAATCCATTCAGATCATCCTTTTTTCAATTGTGATGGCTTCATCATCCTCAACAAGCAGTGCTTCATCTTCAACGACATCGAAATATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACACGCTACAACTTCACTGATCATCTTTTTGCTGCTCTTCAAAGAAAAGGCATTGTTGCCTTCAGAGATGATACAAAGCTCAATAAAGGCAAATCCATAGCACCTGAGCTCTTCCAAGCAATTGAATGGTCTCAAATTTTCATTATTGTCTTCTCAAAGAACTATGCTTCATCAACATGGTGCTTGCGAGAATCAGCAAAAATCCTCGATTGTTTTCAAGTATCAGGAAAATGTATTCTGCCTATTTTCTATGACGTTGATCCATCTGAGGTGAGAAAACAAAGTGGGGGTTACGAGAAAGCCTTTGCTGATCATGAAGAAAGATTCAAAGAAGATTCAGAGATGATGGAGGAAGTGAAACGATGGAGAAGTGCTCTGAAAGAAATAGCCAATCTCTCTGGGTGGGATGTACGGTATGAGCCACAAAGTGCAAAGATCGAAAATATTGTCAAAAAAATAATAAGTATATTGGATGAGAAAATTTCAAGTATGCCAGATGATTTAGTTGGGGTAGAATCTCCTATTGAAGAATTGGAAAAGCTTTTACTTTTGAGGTCGGTTGATGATGTTCGGGTTGTAGGAATTTTTGGAATGGGAGGAATAGGAAAGACAACTCTTGCTACGGTTTTATGGGATAAAATCTCTCATCAATTTGATGCTCGTTGTTTTATTGCTGATGTTTGCAAGTCTGATCCAATTGATGCACAAAAGCAACTTCTACGGGAAGCTCTGAATGAAGAAAATCTTCATATATTCAATCCTTCTATGGCAGCTAATTTGATACGACATAGGTTATGTCATGTGAGAGTGCTTTTAGTTCTTGATAATGTTGATCGAGTTGAACATTTGGAGAAATTAGGTGTGAATCGTAAATGGTTAGGTACAGGGAGTAAAATCATCATAACTTCTAGAGACTTGCATATTTTGAGAGAGTATGGAGTGGATGACGTTTATACCGTTAAACTTTTGAATGCAGACAATGCTCTTCAATTATTTAGTAGAAAAGCTTTCAAATGTGATAACATTGGGAGAGATTATGAAGTCTTATCATATGATGTACTAGAATATGCAAAGGGCCTTCCGCTGGCAATTAAAGTATTGGGCTCATTTTTGTATGGTAGAGAAGTCCATGAGTGGAGAAGTGCATTGGCTAGATTGAAAGAAAATCCAAGTAGAGATATCATGGATGTGCTCCGACTTAGTTACGATGGGCTGGAAGAAATGGAAAAAGAAATATTCCTAGATATTTCCTGTTTCTTCAATGGGTATAGGCACTTTGAAGTTGAGAATGTTCTACATTGCCGTGGATTTCATCCAAGCATTGGAGTTAAAGTTCTCGTTGATAAATCACTCCTAACCATTCTGCCTTCTTACTCTAATTTCCCTTATATTAAAATGCACGATTTGTTAGAAGAGCTGGGTAAAAAAATAATTCGAGAAAATTCACCCGGAGAGCCTAGAAAGTGGAGCAGGCTATGGTTCTACAAAGATTTACGCAATGTTATGTTCGAGGAGGAAATGGAAAATAACGTTAAAGCCGTAGTCTTGAATAGTCCAGAAGAAACTCGAAGATTGAAGGCTCAAAGATTGTCAAAATTGAGTCACCTTAGATTGCTCATACTACGTGGTGTAAAATTTTCGGGCAGCCTCAAATGTCTTTCTAATAAATTGCGATATATTGAGTGGGATGAATATCCTTTCCAGTATTTGCCATCAAGTTTTCAACCGGAGGATCCTGTTCATTTGATCTTAAAGCGCAGTAGCATCAAACAATTATGGGCAGGAAAGAAGTATATGCCCAATTTGATAAGTCTGGATCTTAGGCATTCCAAAAATCTAATAAAGATGCCAAATTTTGGAGAGGTCCCAAATCTTGAGAAGCTGAATCTTGAAGGATGTATAAAACTTGTGGAGATCGATCCATCCATTGGTCTTCTAAGAAAGCTTGCTCACTTGAATTTGACAGACTGCAAAAATCTAGTAAGTATACCCAACAACATTGTGGGTCTCACTTCTCTTGAACGTCTATATCTCTCCGGCTGTTCAAAAATGGTTAATAAACAGCTAAGGGAGCATTTGAAGAAGTTTGATATAAGTAGTGAAACTGCCATGCACTCCCAATCAACATCCTTCAAAAGGTTTTTGTTCCCTTTCCGTTCATTGTATTCTACGACACTTAAAGCTTCAGCTACTTGTTTGTTGCCTTCCTTGCCTAGCTTCTCTTGTATGACAATTCTTGATCTAAGTTTCTGCGATCTGCAACAACTACCTGATGGTATTGGAAGTTTACATAGCTTAGAATCGCTTAGATTAGAGGGAAACAAGTTTGTTACACTGACTTGTAGCCTGAAGGAGCTTTCAAGACTTGTTGAGTTAACATTGTCACACTGCAAGCAGTTGAAATCTTTGCCTGAGCTCCCTTCACGTACGGACATGAATGAGCAGTTGAGAGTCCGATTGTTACAGGCTTTCAACTGCCCAAATTTGGAAGAGAGGGAACGCTGCAGTACCATGATTTTTCCATGGATGGCACAAGTCATTGAGGCGAGGCAGAAACCATCTGTGGGCATGTGTTGGATTGATATTGTTATTCCGGGAAGTGAAATACCAAAGTGGTTCAGCAATCAGAGTGTGGGTAGTTCGATAAACATAGACCCATCTCCCATTATGCATCACAATAATTGGATTGGCTTTGCTTGCTGTGCAGTGTTTGTGTCACGTTATGATCCAATTACTTTGACAAATGAACGGAAGCCTCGTTTAGAAATCTGTATTACATATAAAGCGGATCAGATCATACCTGGCCGCTCTTACTGCAGTTTCAATGGAGATCTGGTAACGGTCGAATCAGATCATATCTGGCTATTCTATTTCCCTTGGGACCATGCAATTGATTTTATGGGTCGGGTATCTCGCAAAAACGGCGAGCAGCGTGATCTTGAAGATATCAAGATGGAGGTTCGGGTTAGTGGCGGCAGTGGTTTGAAGTTGGAGTTTAAAAATTGTGGGTACCATTGGATATCTGAGAAGGACCTGGAACAATTTAAGAATATGCACAGTGCTGATTCCTCAATTGGAAAAGTCGGGTTTTAA 3345 0.3916 MSEGEYGDAIIQGGVSLNFNFQTDDGEVSWSPTNWVLHDIKGAAEESIQIILFSIVMASSSSTSSASSSTTSKYDVFVSFRGEDTRYNFTDHLFAALQRKGIVAFRDDTKLNKGKSIAPELFQAIEWSQIFIIVFSKNYASSTWCLRESAKILDCFQVSGKCILPIFYDVDPSEVRKQSGGYEKAFADHEERFKEDSEMMEEVKRWRSALKEIANLSGWDVRYEPQSAKIENIVKKIISILDEKISSMPDDLVGVESPIEELEKLLLLRSVDDVRVVGIFGMGGIGKTTLATVLWDKISHQFDARCFIADVCKSDPIDAQKQLLREALNEENLHIFNPSMAANLIRHRLCHVRVLLVLDNVDRVEHLEKLGVNRKWLGTGSKIIITSRDLHILREYGVDDVYTVKLLNADNALQLFSRKAFKCDNIGRDYEVLSYDVLEYAKGLPLAIKVLGSFLYGREVHEWRSALARLKENPSRDIMDVLRLSYDGLEEMEKEIFLDISCFFNGYRHFEVENVLHCRGFHPSIGVKVLVDKSLLTILPSYSNFPYIKMHDLLEELGKKIIRENSPGEPRKWSRLWFYKDLRNVMFEEEMENNVKAVVLNSPEETRRLKAQRLSKLSHLRLLILRGVKFSGSLKCLSNKLRYIEWDEYPFQYLPSSFQPEDPVHLILKRSSIKQLWAGKKYMPNLISLDLRHSKNLIKMPNFGEVPNLEKLNLEGCIKLVEIDPSIGLLRKLAHLNLTDCKNLVSIPNNIVGLTSLERLYLSGCSKMVNKQLREHLKKFDISSETAMHSQSTSFKRFLFPFRSLYSTTLKASATCLLPSLPSFSCMTILDLSFCDLQQLPDGIGSLHSLESLRLEGNKFVTLTCSLKELSRLVELTLSHCKQLKSLPELPSRTDMNEQLRVRLLQAFNCPNLEERERCSTMIFPWMAQVIEARQKPSVGMCWIDIVIPGSEIPKWFSNQSVGSSINIDPSPIMHHNNWIGFACCAVFVSRYDPITLTNERKPRLEICITYKADQIIPGRSYCSFNGDLVTVESDHIWLFYFPWDHAIDFMGRVSRKNGEQRDLEDIKMEVRVSGGSGLKLEFKNCGYHWISEKDLEQFKNMHSADSSIGKVGF 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2864g00001 1114 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 219 IPR035897 -
Gabi2864g00001 1114 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 772 IPR044974 GO:0006952
Gabi2864g00001 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 500 IPR027417 -
Gabi2864g00001 1114 Pfam C-JID domain 948 1096 IPR045344 -
Gabi2864g00001 1114 Gene3D - 406 490 IPR042197 -
Gabi2864g00001 1114 ProSiteProfiles TIR domain profile. 72 241 IPR000157 GO:0007165
Gabi2864g00001 1114 Pfam TIR domain 73 243 IPR000157 GO:0007165
Gabi2864g00001 1114 FunFam Disease resistance protein (TIR-NBS-LRR class) 70 243 - -
Gabi2864g00001 1114 Gene3D - 241 402 IPR027417 -
Gabi2864g00001 1114 SMART till_3 73 216 IPR000157 GO:0007165
Gabi2864g00001 1114 Pfam NB-ARC domain 258 476 IPR002182 GO:0043531
Gabi2864g00001 1114 PRINTS Disease resistance protein signature 868 884 - -
Gabi2864g00001 1114 PRINTS Disease resistance protein signature 276 291 - -
Gabi2864g00001 1114 PRINTS Disease resistance protein signature 348 362 - -
Gabi2864g00001 1114 PRINTS Disease resistance protein signature 441 455 - -
Gabi2864g00001 1114 Gene3D - 66 240 IPR035897 -
Gabi2864g00001 1114 SUPERFAMILY L domain-like 549 891 - -
Gabi2864g00001 1114 Gene3D Ribonuclease Inhibitor 600 794 IPR032675 -
Gabi2864g00001 1114 Gene3D Ribonuclease Inhibitor 803 959 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2864g00001 Gabi-Chr2864 6878 13049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2864g00001 69 853 WRKY Transcription Factor Family AT4G12020 30.036 7.45e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2864g00001 - - gmx:100820213 1109.36