Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2863g00002 ATGGAGGAGGGACATAAGGGGGGGCAAGAGAAAGAGAAGGAAGGGGAAGAAGTGAGGTACCGTGGTGTTAGAAGGAGGCCATGGGGGAAGTATGGGGCAGAGATTAGAGACCCAACAAAGCCTACGGGAAGACAGTGGTTGGGGACATTTAATACAGCAGAAGAAGCAGCTAAAGCTTATGATCAAGCAGCCATTGGTTTGAGAGGTGCTCTTGCAATCCTAAATTTTCCTGATGAGTTCTGTTCTCATCTACCTTCAGTATCATCACCATCATCTTCTTCTTCTAATGCTGCCATTGTAAGTTCTTCTTATGCACAACAGAGGGAAGTTATTGAGTTTGAGTATTTGGATAACAAGGTGTTGGAAGACCTCCTTCAGTCAGAAGAAGAGAAGAAATGTGGAAGCAAGACTAAGGACTGA 420 0.4476 MEEGHKGGQEKEKEGEEVRYRGVRRRPWGKYGAEIRDPTKPTGRQWLGTFNTAEEAAKAYDQAAIGLRGALAILNFPDEFCSHLPSVSSPSSSSSNAAIVSSSYAQQREVIEFEYLDNKVLEDLLQSEEEKKCGSKTKD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2863g00002 139 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Gabi2863g00002 139 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Gabi2863g00002 139 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Gabi2863g00002 139 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Gabi2863g00002 139 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Gabi2863g00002 139 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Gabi2863g00002 139 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Gabi2863g00002 139 PANTHER DNA-BINDING DOMAIN 11 130 IPR044808 GO:0003700|GO:0009873
Gabi2863g00002 139 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Gabi2863g00002 139 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2863g00002 Gabi-Chr2863 50087 50506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2863g00002 1 132 AP2-EREBP Transcription Factor Family AT3G23230 54.676 9.97e-43 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi2863g00002 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2863g00002 - - gmx:100807295 156.762