Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2861g00003 ATGAGGCTTGTCATCTCAGCTCTTTGTGTTCTTGTGCTATTCTCTTTTGCAGTTGCTTATGATCCTTTGGATCCAAACGGAAACATAACAATCAAATGGGATATAATGTCATGGACACCAGATGGCTATGTGGCAGTGGTAACAGTCCACAATTTTCAAATGTTTCGGCATATCATGAATCCTGGGTGGACCTTGGGATGGACATGGGCTAAGAAAGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGCTCTAAATTCAAAGGCAGTATACCTCACTGCTGCAAGAAAATTCCAACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAACCAGCAATTCTCAAACTGTTGTAAGGGTGGAGTGGTTGCAGCATGGGGCCAAGATCCTTCACAAGCTATCTCATCCTTCCAAGTGAGTGTAGGACAAGCTGGTACCACAAACAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCAGGACCAGGCTATACTTGTGGCCCTGCAAAGATTGTTCCTTCCACAACTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCAAGTTGTTGTGTATCTTTGTCATCCTTCTATAATGAAACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTGTGTGAAGAGTGACTCTAAAATTCTCAGCATGCTGGGAGTTCACACTCCAAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCATATGTGCCCAATAAGGGTCCACTGGCATGTGAAGCTCAACTATAAAGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAATTACTCCCTCTGGACTCTTGCTATTCAGCATCCAAATCTTAACAATCTCACCCAAGTTTTCAGCTTTGATTACAAGCCTATTCTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTATTAATGGAAGCTGGACCAACTGGAAATGTTCAGTCAGAGTTGCTTCTTCAGAAGGACAAGGACACCTTCACATTCAAGCAAGGGTGGGCATTTCCTCACAAGGTCTACTTTAATGGTGATGAATGCATGCTTCCCCCACCTGATACCTATCCATTTCTCCCTAACTCTGCACATGCAAACCTATTTTCCTTCCCTGAATTCATCTTGTTACTGCTTTTCTTGCTAGCAGTTTGGTAA 1296 0.4306 MRLVISALCVLVLFSFAVAYDPLDPNGNITIKWDIMSWTPDGYVAVVTVHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGSIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQAISSFQVSVGQAGTTNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMLGVHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNLTQVFSFDYKPILPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSELLLQKDKDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSAHANLFSFPEFILLLLFLLAVW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2861g00003 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Gabi2861g00003 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Gabi2861g00003 431 PANTHER PROTEIN COBRA 8 422 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2861g00003 Gabi-Chr2861 19355 21776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2861g00003 1 427 COBRA Gene Family AT3G29810 66.287 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2861g00003 - - gmx:100798678 849.351