Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2859g00020 ATGTCTAGCTCCGACGGAACCACTAACGGCGTCAGTAACGGCTCAATCATTGATCCACAGCGTCAACAAATAACCGTCAAGAAACCGCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGACGCCGTATAAGGATGCCAATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGCGAGTTGGGCCACAAGTCCGACGGTCAAACCATCGAGTGGTTACTTCGTCAAGCCGAGCCCTCTATCATAGCCGCCACCGGCACTGGCACCACTCCCGCCAGCTTCTCCTCCGTCTCCCCCTTGCTTGCTCCCACGCCCTTTATACTCGGCAAGCGTATACGCACGGATGACGACGCCTCTCCTGCTTCAAAGGATGATGGCGTCTCTGTAGGGTCTTTGGTTGGGCCTGCTGCCCCTGCCGGGTTGTGGGCCCTTCCCACGAGGCCCGATTTCGGACAATTTTGGAGCTTCGCTGCGGCTGCTGCTCCGCCGGAAATGGTGGTGCAGCCGGCGGCGGTGTCGGTTTCTCAGCAGCAGCAGGCTTCGTTGTTCGTTCATCATCAGCATCATCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGACTGGGGAATTATCTTCCGGGGCATCTGAATTTGCTAGCTTCATTGTCCGGAGGTCCTGGAAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA 708 0.5819 MSSSDGTTNGVSNGSIIDPQRQQITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSPLLAPTPFILGKRIRTDDDASPASKDDGVSVGSLVGPAAPAGLWALPTRPDFGQFWSFAAAAAPPEMVVQPAAVSVSQQQQASLFVHHQHHHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2859g00020 235 MobiDBLite consensus disorder prediction 1 26 - -
Gabi2859g00020 235 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 205 IPR005333 GO:0003700
Gabi2859g00020 235 ProSiteProfiles TCP domain profile. 31 85 IPR017887 -
Gabi2859g00020 235 MobiDBLite consensus disorder prediction 27 43 - -
Gabi2859g00020 235 Pfam TCP family transcription factor 31 106 IPR017887 -
Gabi2859g00020 235 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2859g00020 Gabi-Chr2859 115735 118305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2859g00020 12 235 TCP Transcription Factor Family AT5G23280 62.397 2.08e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2859g00020 TCP 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2859g00020 K16221 - qsa:O6P43_032281 339.732