Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2859g00019 ATGTCTAGCTCCGACGGAACCACTAACGGCGTCAGTAACGGCTCAATCATTGATCCACAGCGTCAACAAATAACCGTCAAGAAACCGCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGACGCCGTATAAGGATGCCAATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGCGAGTTGGGCCACAAGTCCGACGGTCAAACCATCGAGTGGTTACTTCGTCAAGCCGAGCCCTCTATCATAGCCGCCACCGGCACTGGCACCACTCCCGCCAGCTTCTCCTCCGTCTCCGTCTCCCTCCGCGGCGGCGCCGTCTCCAACTCACTCTCCTCCCCTTCCACCACCTCCGATCATAAGCCCTTGCTTGCTCCCACGCCCTTTATACTCGGCAAGCGTATACGCACGGATGACGACGCCTCTCCTGCTTCAAAGGATGATGGCGTCTCTGTAGGGTCTTTGGTTGGGCCTGCTGCCCCTGCCGGGTTGTGGGCCCTTCCCACGAGGCCCGATTTCGGACAATTTTGGAGCTTCGCTGCGGCTGCTGCTCCGCCGGAAATGGTGGTGCAGCCGGCGGCGGTGTCGGTTTCTCAGCAGCAGCAGGCTTCGTTGTTCGTTCATCATCAGCATCATCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGACTGGGGAATTATCTTCCGGGGCATCTGAATTTGCTAGCTTCATTGTCCGGAGGTCCTGGAAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA 774 0.5879 MSSSDGTTNGVSNGSIIDPQRQQITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSLRGGAVSNSLSSPSTTSDHKPLLAPTPFILGKRIRTDDDASPASKDDGVSVGSLVGPAAPAGLWALPTRPDFGQFWSFAAAAAPPEMVVQPAAVSVSQQQQASLFVHHQHHHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2859g00019 257 MobiDBLite consensus disorder prediction 1 26 - -
Gabi2859g00019 257 MobiDBLite consensus disorder prediction 27 43 - -
Gabi2859g00019 257 MobiDBLite consensus disorder prediction 1 43 - -
Gabi2859g00019 257 MobiDBLite consensus disorder prediction 106 122 - -
Gabi2859g00019 257 Pfam TCP family transcription factor 31 193 IPR017887 -
Gabi2859g00019 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 231 IPR005333 GO:0003700
Gabi2859g00019 257 ProSiteProfiles TCP domain profile. 31 85 IPR017887 -
Gabi2859g00019 257 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2859g00019 Gabi-Chr2859 115735 118305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2859g00019 12 257 TCP Transcription Factor Family AT5G23280 65.060 1.64e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2859g00019 TCP 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2859g00019 K16221 - qsa:O6P43_032281 368.237