Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2859g00004 ATGATGTTGATGCATTGCCATGAATTGTACAAGCCAGTTTTTATCATGATTTTAGTTAACTTAGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGACAACATGATCATTGTAACATATCGACAGGCAATTTCATTTATCTTCATGGCACCTATTGCCTGCTTCTATGAAAGGAAACACAAACTTGAGGCTCACATAATATGTCTTCTTTTCCTCGCTGCTCTTGTCGGAGTAACACTGCCCCAATACCTATTTCTTCTTGGACTTGAATATACTTCTGTCACGTTCTCATGTGCATTCCTCAACATGGTGCCTGTATTTACATTCATTGTGGCACTGCTATTTGGGATAGAGAAGGTGAACATGAAAAGCAACAGTGGTAAAGCCAAAGTCTTGGGAACCTGTGTGTGCATTGGTGGAGCTTTGTTATTGGTCCTTTATAAAGGAATGCCCTTAATCAACCCACTATCGCAGCACAAAACAAACAAAGCTACAATAACACCTCCAGCTGCCAAGTTAGATAAATGGATTATAGGTTCAATACTTCTGACTGCCGGCTGCTTCTTGTGGTCTTCATGGTTTATTATACAAGCAAAAATTAGCAAAAAATATCCATGTCAGTACTCTAGCACAGCTATTTTGTCACTTTTTTCTGGCATTCAATCAGCAATATCAACTTTGATCATCAAGAGAAATCATACCTCGTGGATTCTCAAAGGGAAGTTAGAAATAATGAGTGTTATATATGGATTGGTGGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTATTCCCCTTGTGCAGATATTTGTGGCCGTGCTTGATTTCTATATACTAAAGGAGGAAATTTACATGGGAAGTGTTGCAGGATCTGCCTTGGTTATTGCTGGCATGTACATTCTTCTATGGGGAAAAAGTAAAGAGGGAGAGCAATATGTCCTGAAGGATACTCAAGCAAATGAAGATGTAGAATATCAATAG 1038 0.3921 MMLMHCHELYKPVFIMILVNLALAFVNLLLKKVLNEGMDNMIIVTYRQAISFIFMAPIACFYERKHKLEAHIICLLFLAALVGVTLPQYLFLLGLEYTSVTFSCAFLNMVPVFTFIVALLFGIEKVNMKSNSGKAKVLGTCVCIGGALLLVLYKGMPLINPLSQHKTNKATITPPAAKLDKWIIGSILLTAGCFLWSSWFIIQAKISKKYPCQYSSTAILSLFSGIQSAISTLIIKRNHTSWILKGKLEIMSVIYGLVGSGLCYVAMSWCVKQRGPVFTAAFIPLVQIFVAVLDFYILKEEIYMGSVAGSALVIAGMYILLWGKSKEGEQYVLKDTQANEDVEYQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2859g00004 345 PANTHER WAT1-RELATED PROTEIN 12 328 IPR030184 GO:0016020|GO:0022857
Gabi2859g00004 345 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Gabi2859g00004 345 Pfam EamA-like transporter family 12 151 IPR000620 GO:0016020
Gabi2859g00004 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 326 - -
Gabi2859g00004 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2859g00004 Gabi-Chr2859 13164 14750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2859g00004 8 257 Nodulin-like Gene Family AT3G30340 48.016 2.86e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2859g00004 - - gmx:100802053 571.237