Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2856g00004 ATGTCCAAAGAAGAAGACTCCAAGCACAACCCACCAAATGTAGTTGCCAAATTAATGGGGATTGAAACCCTTCCAAGGGAAGAGCCTAATTTGTCTGTGGAAAGAAGCCACAGAAAAGGTGATTCTCAACATATGTATGGTCATTTAGGGCCACCATTCCAACATTGGCAGCTGAAAGATAGGTTTATGGATAAGGAGATGCTTCATGAAGTTCATCCAAGTAGAGAACAGATTGCTTACAAAGATATCTATGAAATATGGCTCCAATCTCAGAAAGCAAGCCATGTAAGAGACAAGACACCAGAGAGAGGAAGGTGGAGGGAAGATGTTGATAGGGGAAAAATGGCTCTCATTCATCAGAAATTCATGGAAGCAAAACATTTGTCAACAGATGAGAGACTGCGCCAGTCCAAGCAATTTGAAGATGCCTTGGAAATTTTAAGCTCCAATAGTGATCTCTTAATCAGGTTATTGGATTCTAATAAGCTTTATGAACATCACTCTACTACTCCACCAGCTCAGACAAAGTGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAATGGCAAATCTGGTGGAAAGGGGAAGAAGAATGAGAGACTGATTAAGAAACCACCAAATGTTGATCAAGCAGCTATATGGGAGAACAAGATTCATGGATACTATCCAGAAAGTCAGAAAGTTGATGAGTTCCCAGTTCAATCTACTCGAATAGTGGTATTGAAGCCTAGCTTTGGGAGGACACATAAACTCAAGGCTGTGGTTTCTCCAACAACTTCATCACCTCTAGAATCCACAGAAGCGGCAAAAGAGATCACACAGCAAATGCATGAAGGTTTGAGGAGTTATCAAAAGGGTGGAACTTTATATTATGGCTATTCTGGTGATGAGTGTTCATTTAACAAATCATATCATGAGTATACAGCTGGGAATTGCAGTGATTTGGAAGCTATGTCACCATTGACAAGGCATTCATGGAATTACACCAATGGCTGTGACAGTACTTATTCTACACCATCATTGGGTCTTGCATCCTGTTCTCCTGAGTCATCAGTGTGTAGAGAGGCAAAAAAACGACTTTCTGAAAGATGGACCATGATGGCATCATATAAAAAGGGTCCTCAAGAACAAAGACATTTGCGGAGAATCCCTACCTTGGGTGAGATGCTTTCTCTTTCCCATACAAAGAAATCTGCAACATCTGAGTTTGAGGGTATTGATGAATGCCAAGAACCAAGCAAATCTGTTTCTTGTAGTCACTCTTTCAATGAAGGAACATGCATTGATGGTTCTCCTAAAAATCTTCCCAGGTCAAATTCTGTCCCTGCATACTCTACTGTCTATGAAACCGGGCTCAGCATTGAGGTTTGTGATCACAATGCTGGCAAAGCACATGACTCCAAGGTGCTGACAAAGTCAAAGAGTAAGAGATCATCATTTAAAGGGAAAGTTGCCAGTTTCTTGTTCTCAAGGAAGAAGAAATCAACCAAGGAAAAATCTTGTCCTACTCAATCTAAAGATGAATCTCAATATAATTTCATTGAAACGTCAGTTTTTCCAGTAAATTCACCTGGAGTCCTTACGGATGATATGTCTCAAAGCATCAATGGTGGTGGCTTTGAAGAGTGTTCTATTACAGCTCTATATGAATCATCAGGCAAAACTTCAACAGATTCAGTCTCTAAGGGACACCAGCAAGGCATAATAACACCAGAGCCTGGATTGACAGTGACAAAGCCCATGGTGCCAGATATTTCAAGTGAAAACCAAGAACAGCCAAGTCCAATCTCAGTGTTAGAACCTCCATTTGAAGATTATAATGCAGTTCATGAATCCTTGGACTCTACAATGGGTGGTCACCAGGGATCATGGATGCCTCTGAAGTCCAATTTAATAGACAAATCACCACCTATAGAATCAATAGCTCGAACCCTTTCATGGGATGATTTTTGTGCAGATGTAGCAGCAAGTCCTTATCCATTAAAACCCCTCATGGTTTCTTCCTTAGATGCCAAGGAAGAGGAACAAGAGTGGCTTCTCTTGGTCCAGAAACTACTATCAGAAGCTGGACTTGATGATCAAGAATTGTGCAACTCCTTTTACACTAGATGGCATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATACGCCAATCTGAGTGACAAGGAGTCTCAGCCTCTCCATGATGCCAGGAGAAGGAAGATGAGATCAAATCAGAAGCTTGTATTTGACCATGTCAATGCTGCTCTATTGGAAATTATTGGTTATGGATCAGAGAGTTACTACTTCAAGGGTAGAATGTATAGTGGGAGCCACAGCAAGCTCCCAGTCCAAGAGGGTGCATCTCCATTGTTGTTGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCTAGTGGGAGGAGGTGTGCTTGGGGGGGCTGTGGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTGAAGAAAGAGGTTGTGGGGATAGGGTGGATTGAGCTTAAGGAATTGGAGATTGATATCTTGGGGAGGGAAATAGAAGGAAAGTTGATAGAAGAGCTTGTTGAGAATGCTGTGGTTGATTTTACTGGCAGAACCTGA 2607 0.4181 MSKEEDSKHNPPNVVAKLMGIETLPREEPNLSVERSHRKGDSQHMYGHLGPPFQHWQLKDRFMDKEMLHEVHPSREQIAYKDIYEIWLQSQKASHVRDKTPERGRWREDVDRGKMALIHQKFMEAKHLSTDERLRQSKQFEDALEILSSNSDLLIRLLDSNKLYEHHSTTPPAQTKCITLIKPLKMVDNGKSGGKGKKNERLIKKPPNVDQAAIWENKIHGYYPESQKVDEFPVQSTRIVVLKPSFGRTHKLKAVVSPTTSSPLESTEAAKEITQQMHEGLRSYQKGGTLYYGYSGDECSFNKSYHEYTAGNCSDLEAMSPLTRHSWNYTNGCDSTYSTPSLGLASCSPESSVCREAKKRLSERWTMMASYKKGPQEQRHLRRIPTLGEMLSLSHTKKSATSEFEGIDECQEPSKSVSCSHSFNEGTCIDGSPKNLPRSNSVPAYSTVYETGLSIEVCDHNAGKAHDSKVLTKSKSKRSSFKGKVASFLFSRKKKSTKEKSCPTQSKDESQYNFIETSVFPVNSPGVLTDDMSQSINGGGFEECSITALYESSGKTSTDSVSKGHQQGIITPEPGLTVTKPMVPDISSENQEQPSPISVLEPPFEDYNAVHESLDSTMGGHQGSWMPLKSNLIDKSPPIESIARTLSWDDFCADVAASPYPLKPLMVSSLDAKEEEQEWLLLVQKLLSEAGLDDQELCNSFYTRWHSLESPLDPSLRDTYANLSDKESQPLHDARRRKMRSNQKLVFDHVNAALLEIIGYGSESYYFKGRMYSGSHSKLPVQEGASPLLLDHIVAQMKELIASGRRCAWGGCGDSNSLVVENVVKKEVVGIGWIELKELEIDILGREIEGKLIEELVENAVVDFTGRT 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2856g00004 868 Pfam Protein of unknown function (DUF3741) 120 159 IPR022212 -
Gabi2856g00004 868 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 867 - -
Gabi2856g00004 868 MobiDBLite consensus disorder prediction 28 44 - -
Gabi2856g00004 868 MobiDBLite consensus disorder prediction 1 49 - -
Gabi2856g00004 868 Pfam Domain of unknown function (DUF4378) 683 858 IPR025486 -
Gabi2856g00004 868 MobiDBLite consensus disorder prediction 557 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2856g00004 Gabi-Chr2856 62564 66005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2856g00004 1 865 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 38.419 3.79e-148 458