Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2853g00031 ATGGCTTCTATGAACTTGTTGGGTTTCTCTCTCTCATCCCCTCAAGAACATCCATCTAGTACTCAAGACCATTCTCAAACGGCACCGTCTCGTTTTGGTTTCAACCCTGATGGAATCTCAGCCTCTGATGTACAAGGAGAGTGCTTTGATCTCACTTCTCACTCAACTTCTCATTCACTCAACCTTCCTCCTTTTGGCATATATGAAGCTTTCAACAGAAATAATAATATTCATACCACTCAAGATTGGAAGGAGGACTACAACAACCAAAACTTGCTATTGGGAACTTCATGCAATAACCAAAATGTGAACAACCATCACCAACAACAACAACAGCCAAAGCTTGAAAACTTCCTTGGACACTCTTTTGGTGATTATGAGCACCCAACCTACGGTGCTAATAACTCATCCTCAGCAGATTTTATGTTTCCAAACTGTTCATTACAACTTCCTGCTCAGCCCGCAACGGCCGGTGTCGGTGGTGATAGCGGTGGTGGTGGTAGTACAAGTACCGGTAGCTCGATCGGTTTGTCCATGATAAAGACATGGCTGAGGAACCAACCACCTCAAACAGACAACAACATTAACAACAATGAAAACTGTGGCAGTGCAGCACCTGCACCAGCATCTAGAACAAGTGTGCAGACACTTTCGCTTTCCATGAGCACTGGTTCACAATCAAGCTCATCAAAGGCAAATGTGGGTGGAGAGGGTTCTTCTTCCGATAACAAGCAACCACCAACCACCACATCCCTTGATACCAACCAAACCGGAGCTATTGACACTGTGCAGAGAAAGTCCATTGACACCTTTGGACAAAGAACTTCCATATACCGTGGTGTAACAAGGCATAGGTGGACGGGGAGATATGAGGCTCACCTTTGGGATAATAGTTGTAGAAGAGAAGGACAAACTCGCAAAGGAAGGCAAGTTTATTTGGGAGGTTATGACAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTAGCAGCACTAAAATACTGGGGAACAAATACCACAACAAATTTTCCTATTAGCCACTATGAAAAAGAGTTGGAAGAAATGAAGCACATGACCAGGCAAGAGTATGTTGCGTCATTGAGAAGGAAGAGTAGTGGGTTTTCTCGCGGTGCATCCATTTATCGAGGAGTAACGAGACATCATCAACATGGGAGATGGCAAGCTAGGATTGGAAGAGTTGCAGGCAACAAAGATCTCTACTTGGGAACTTTCAGCACCCAAGAAGAGGCAGCAGAAGCATATGATGTAGCAGCCATCAAATTCCGAGGGTTGAGTGCTGTTACAAACTTTGACATGAGCAGATACGATGTGAAGAGCATACTTGAAAGCAGCACTTTACCCATTGGTGGTGCTGCAAAGCGTTTGAAGGATATGGAGCAAGTTGAATTGAGTGTGGATGTTCATAGGACAGAAGAAGATAATAGCATGAACTCACACTTAACTGAAGGAATCAATAACTATGGAATAACAAACCATCATGGTTGGCCTCATGCTCTTGCTTTTCAGCAACCATGTACTACTACCATGCAATATTACCCTTATGGACAGAGGCTATGGTGCAAACAAGAACAAGATTCTGATGCCTCTCACACTTTCCCTTCAGATCATAATTATCAACTACAGTTAGGGAATACTCACAATTTCTTTCAGTCAAATCCTGGGTTGCATGGTTTCATGAGCATGGATAATTCTGCATCCATGGACAATAGCTCTGGATCTAACTCTGTAGTTTATGGTGGGGATGGTAATAATAATGGTTATGGAGGTGGTGGTGGTGGCTACGTGATTCCCATGGGTGGTACTACTACAACTAATGTTATTGCAAATGATGGTAACCAAAGTCAAAGAAGTCATGCTTTTGGTGATAGTGAGATAAAGACACTTGGTTATGAAAGTGTTTATGGCTCTAGTACTATTGATCCTTATCAAGCACATGCAAGGAACTTGTATTATCTTTCGCAGCATCAATCATCTGTAGATGCAGTTAAGGCTAGTAGTGCATATGATGAAGGATCCACATGCAATACTTGGGTTCCAACAGCTATTCCAACTCTTGCACCAAGACCTACCAATATGGCTCTCTGCCCCGGAGTTCCACCATTCACGTTATTGCATGAATAG 2139 0.431 MASMNLLGFSLSSPQEHPSSTQDHSQTAPSRFGFNPDGISASDVQGECFDLTSHSTSHSLNLPPFGIYEAFNRNNNIHTTQDWKEDYNNQNLLLGTSCNNQNVNNHHQQQQQPKLENFLGHSFGDYEHPTYGANNSSSADFMFPNCSLQLPAQPATAGVGGDSGGGGSTSTGSSIGLSMIKTWLRNQPPQTDNNINNNENCGSAAPAPASRTSVQTLSLSMSTGSQSSSSKANVGGEGSSSDNKQPPTTTSLDTNQTGAIDTVQRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTNTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESSTLPIGGAAKRLKDMEQVELSVDVHRTEEDNSMNSHLTEGINNYGITNHHGWPHALAFQQPCTTTMQYYPYGQRLWCKQEQDSDASHTFPSDHNYQLQLGNTHNFFQSNPGLHGFMSMDNSASMDNSSGSNSVVYGGDGNNNGYGGGGGGYVIPMGGTTTTNVIANDGNQSQRSHAFGDSEIKTLGYESVYGSSTIDPYQAHARNLYYLSQHQSSVDAVKASSAYDEGSTCNTWVPTAIPTLAPRPTNMALCPGVPPFTLLHE 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2853g00031 712 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2853g00031 712 ProSiteProfiles AP2/ERF domain profile. 379 437 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 FunFam AP2-like ethylene-responsive transcription factor 378 439 - -
Gabi2853g00031 712 SUPERFAMILY DNA-binding domain 276 345 IPR016177 GO:0003677
Gabi2853g00031 712 SMART rav1_2 379 443 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 SMART rav1_2 277 349 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 FunFam AP2-like ethylene-responsive transcription factor ANT 276 345 - -
Gabi2853g00031 712 Gene3D AP2/ERF domain 277 345 IPR036955 GO:0003700|GO:0006355
Gabi2853g00031 712 Gene3D AP2/ERF domain 379 439 IPR036955 GO:0003700|GO:0006355
Gabi2853g00031 712 MobiDBLite consensus disorder prediction 163 265 - -
Gabi2853g00031 712 PRINTS Ethylene responsive element binding protein signature 419 439 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 PRINTS Ethylene responsive element binding protein signature 278 289 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 MobiDBLite consensus disorder prediction 1 33 - -
Gabi2853g00031 712 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 529 - -
Gabi2853g00031 712 MobiDBLite consensus disorder prediction 154 265 - -
Gabi2853g00031 712 ProSiteProfiles AP2/ERF domain profile. 277 343 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 Pfam AP2 domain 277 335 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 Pfam AP2 domain 379 429 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 CDD AP2 378 439 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 CDD AP2 276 345 IPR001471 GO:0003700|GO:0006355
Gabi2853g00031 712 SUPERFAMILY DNA-binding domain 378 439 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2853g00031 Gabi-Chr2853 363214 367713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2853g00031 174 531 AP2-EREBP Transcription Factor Family AT5G17430 60.714 2.41e-133 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gabi2853g00031 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2853g00031 K09285 - gmx:100797584 942.184