Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2853g00023 ATGTTCTCCAATATCTTCTCCTTCCTCCACCGCCATTTTTCCATCACCACCAAGCTCCCAAACCTCTCCAAGATCCCAACTAGGCACAGAAACTTTGTTATTCGTGAAGCCCAGAAGTCCCTCACTGATTACCTTCATGGCACAAGGTGCTTGCCCTTTACCTATGCTGAGCAAATTGGCAACAACACTCTTCGTTCCCTCACTAATCTTATTGCAAAGGTAGATTTTTCTGCTTCCAGTTTCTCCAAAAACTTTGAGAAGGTTCTTAGGTACCACCCCATTAATGAATTTGAAGTCTTTTTTGAAAGCATAGGTATAGAGTACAATCTGGTTTCTGGGTTGTTGCCTAATGACAAGGTGTTCTTTTCTCAAGATGGAACCCTTTTGGATGCTGCTTGTGCACTTTCTGATTTTGGGTTTCCGTGGGAAAATTTGGGTGTGTTGTATATGGAGAGGAGGTCCATATTTGGAAGAAGTGGTGCAGAGTTGAAATCAAGGCTTAGTGTTTTTAAAGGGTTTGGTTTTGGTAATGTTGAAGTCATTGGCATATGTTTGGCTTTCCCTTTTGTTTTATGTGAGGAAGGCCAAGGTGGTGTTGGAATTGATGGGTTGTTTAATGATCTGAAGTTGATATTTTTGGATTTTGCTTTGGCAAGGTCTGTTGAGGGAAATGTGGATTCTTGGCATGAGGTGTGTAGAAAATTACGAGTGTTTTTCGATTTAAATTGCTGGGATGGCAAGTTAGGGGAACTCATGGGAAGGAATAAAAGTATCTTTCTTGAACATAAAGAAGAGGATTTAGTTAATAAAGTAGAGTATTTCTGTAGATTTGGTGGAAAGAAGGAGGAAGTGGCTCGGTTGATTCTACAATGCCCGGAATTGTTGAATCTTGATATGGAGAAGCCGGCGATTAATGTATTGAAGCTGTTGAATCACTTTGGTCTGAGCTCAAAAGACCTGGAGGATGTTAGTAGAAATTTTGCTCATGTTTTGGGAACAAATAAAATGGTTAATCTGCCTAACATTATGAGGGCTTTGGGTTTACAAGAGTGGTTCTTCAATAAAATCAAGGATGGACATCATCATTTGTTAGGAGATTATATCACAAGCTATCCTAATGAAGACCAGGATAAAGATTATCAAGATGGCTTAAGGATGATTCACATTTCAAGAGCCCGGGTTCATAGTATTAATAAATTAAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGCTTTGACTATGAATGTTTTGAATCATTTGCATGGCACTAGTAGTGAGTTACAAGAAAGGTTTGATTGCCTTCTACGTTCAAGGATTGAATTCTCAAAGCTCTGTATGATGGTAAGAATGACTCCCAGGATTCTAAACCAAAATTCTCGAATTATAGAGCGAAAGGTGAATTTCTTCCACCAGGAAATGGGAACTACTTTAGACTATGTGGAAACTTTTCCGGCAATATTGTATTATCACTTAGAGGACCGAATTATACCTAGATACAGATTCCATATATGGCTTACAGAAAAGGGTCTGTGTTCTAAAAGATATTCTGTTCGAAGTATGATTGCAAACACTGAAAAGGAATTTGTAGCTCGTGTTTTTAAAATTCATCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTGTCACATTAAATTGTCAATGTAA 1668 0.3849 MFSNIFSFLHRHFSITTKLPNLSKIPTRHRNFVIREAQKSLTDYLHGTRCLPFTYAEQIGNNTLRSLTNLIAKVDFSASSFSKNFEKVLRYHPINEFEVFFESIGIEYNLVSGLLPNDKVFFSQDGTLLDAACALSDFGFPWENLGVLYMERRSIFGRSGAELKSRLSVFKGFGFGNVEVIGICLAFPFVLCEEGQGGVGIDGLFNDLKLIFLDFALARSVEGNVDSWHEVCRKLRVFFDLNCWDGKLGELMGRNKSIFLEHKEEDLVNKVEYFCRFGGKKEEVARLILQCPELLNLDMEKPAINVLKLLNHFGLSSKDLEDVSRNFAHVLGTNKMVNLPNIMRALGLQEWFFNKIKDGHHHLLGDYITSYPNEDQDKDYQDGLRMIHISRARVHSINKLNFLHGLGFGENALTMNVLNHLHGTSSELQERFDCLLRSRIEFSKLCMMVRMTPRILNQNSRIIERKVNFFHQEMGTTLDYVETFPAILYYHLEDRIIPRYRFHIWLTEKGLCSKRYSVRSMIANTEKEFVARVFKIHPAAPKHWFEQFCHIKLSM 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2853g00023 555 PANTHER CGI-12 PROTEIN-RELATED 39 536 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 Gene3D Transcription termination factor 3, mitochondrial 385 550 IPR038538 -
Gabi2853g00023 555 Gene3D Transcription termination factor 3, mitochondrial 217 364 IPR038538 -
Gabi2853g00023 555 Pfam mTERF 426 529 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 Pfam mTERF 254 344 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 SMART mt_12 478 512 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 SMART mt_12 146 176 IPR003690 GO:0003690|GO:0006355
Gabi2853g00023 555 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2853g00023 Gabi-Chr2853 275166 277392 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi2853g00023 mTERF 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2853g00023 - - lja:Lj1g3v2862750.1 720.694