Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2853g00015 ATGTTTTATGCTGTGGCTTGCATTAGATACCAATTTGGTGTTGTTGTTAGTTTGTTTCTGCTGATTAATTGTGGCATGACCTATGGGACTGAGACTGATATCTTCTGCTTGAAAAATGTGAAGAATTCACTTCAAGACCCCTACAATTATTTGCAATCATGGGATTTCAACAACAAAACAGAAGGATATATATGCAAATTTACTGGGGTAGAATGTTGGCATCCTGATGAAAATAGAGTCTTAAATCTCAAACTGTCAAACATGGGACTAAAGGGACAGTTTCCTCGCAGCATTCAGAATTGCTCAAGCTTGACAGGATTAGATCTTTCAATTAACAGACTCTCTCAAACCATTCCACAAGATATATCTACCCTTCTTAAGTTTGTGACAACTCTTGATCTATCATCAAATGATTTTACTGGGGATATCCCTTTGTCCCTTGCAAACTGTACTTATCTTAATAGTCTTAAACTTGATCAAAACCAACTCACAGGTCATATTCCTGCTGAATTGGCTTTGCTCCAAAGGCTTAAGTCATTTAGTGTCTCCAACAATCTTTTGACAGGGCAAGTTCCAGCCTTTAGAAATGGTATTGTTACAGCAGACAGTTATGCAAATAATTCAGGCCTCTGTGGTGTCCCCTTGGAGCAATGCCAGGCCATAGCTTCCAAGACTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTCACTGCTGCAGCATTAGGATTGGGTATTGGATTGTTCTTCTATGTGCGGCGCATGTCTTATAAGAAAAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTTAAGGGAACCAAAGCAATAAAGGTTTCTATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAAGGATCTCATGAAGGCTACTAGTAACTTCAGTAAAAGCAATATTATTGGGTCTGGAAGATCAGGAACTATTTACAAAGCTGTCCTTCATGACGGCACATCGCTCATGGTCAAGAGATTGCAGGAATCTCAACAACACACAGAGAAAGAATTTCTGTCTGAGATGGGAACGCTAGGGACTGTCAGACATCGTAACTTGGTTCCCCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTTCTGGTCTATAAAAATATGCCAAATGGTACCCTACATGATCAACTACATCCTGCTGATGGTGGGAGCACCATGGACTGGTCTCTAAGGCTCAAAGTTGCAATTGGAGCAGCAAGAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGCATCATCCACCGAAACATAAGCTCTAAATGCATCCTGTTGGACGTAGATTTTGAGCCCAGAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTATGCAAAAACTTTGATGGCTACACCTAAAGGGGATGTTTATAGCTTTGGGACTGTGCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCCATGTGGCTAAAGCTCCGGAAACTTTTAAAGGAAATTTGGTAGAATGGATTACACAGTTCTCTAGCAATTCAAAACTTCAGGATGCCATTGATGAATCACTAGTTGGGAAGGGTGTTGATCATGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTTACAGAAACTCCAAAGGAGAGGCCCACTATGTTTGAAGTATACCAGCTTCTAAGAGCTATTGGGAGTAGATATAATTTCACAATTGAGGATGAGATTATGATGCCTACAGATACTGGTGATACTGATAACTTAGAAGAACTTATTGTAGCTCGAGAGCAAACTGGTTGA 1854 0.4072 MFYAVACIRYQFGVVVSLFLLINCGMTYGTETDIFCLKNVKNSLQDPYNYLQSWDFNNKTEGYICKFTGVECWHPDENRVLNLKLSNMGLKGQFPRSIQNCSSLTGLDLSINRLSQTIPQDISTLLKFVTTLDLSSNDFTGDIPLSLANCTYLNSLKLDQNQLTGHIPAELALLQRLKSFSVSNNLLTGQVPAFRNGIVTADSYANNSGLCGVPLEQCQAIASKTNTAVIAGAAVGGVTAAALGLGIGLFFYVRRMSYKKKEEDPEGNKWARSLKGTKAIKVSMFEKSISKMNLKDLMKATSNFSKSNIIGSGRSGTIYKAVLHDGTSLMVKRLQESQQHTEKEFLSEMGTLGTVRHRNLVPLLGFCMAKKERLLVYKNMPNGTLHDQLHPADGGSTMDWSLRLKVAIGAARGLAWLHHSCNPRIIHRNISSKCILLDVDFEPRISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAKTLMATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWITQFSSNSKLQDAIDESLVGKGVDHELFQFLKVACNCVTETPKERPTMFEVYQLLRAIGSRYNFTIEDEIMMPTDTGDTDNLEELIVAREQTG 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2853g00015 617 Gene3D Transferase(Phosphotransferase) domain 1 380 598 - -
Gabi2853g00015 617 FunFam Leucine-rich repeat receptor-like protein kinase 30 193 - -
Gabi2853g00015 617 Pfam Protein tyrosine and serine/threonine kinase 307 578 IPR001245 GO:0004672|GO:0006468
Gabi2853g00015 617 CDD STKc_IRAK 310 579 - -
Gabi2853g00015 617 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Gabi2853g00015 617 ProSiteProfiles Protein kinase domain profile. 304 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2853g00015 617 SUPERFAMILY L domain-like 31 196 - -
Gabi2853g00015 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 265 379 - -
Gabi2853g00015 617 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Gabi2853g00015 617 Gene3D Phosphorylase Kinase; domain 1 265 378 - -
Gabi2853g00015 617 SUPERFAMILY Protein kinase-like (PK-like) 282 579 IPR011009 -
Gabi2853g00015 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 193 - -
Gabi2853g00015 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2853g00015 Gabi-Chr2853 179047 181524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2853g00015 18 593 Receptor kinase-like Gene Family AT3G28450 46.299 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gabi2853g00015 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2853g00015 - - gmx:100817267 998.423