Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2853g00014 ATGTTGGTGAAGATGGTTCTGAGTAGCCGAATTTTCATTGCTAGTGTTGTTGTTAGTTTGTTTCTGCTGATTAATTGTGGCATGACCTATGGGACTGAGACTGATATCTTCTGCTTGAAAAATGTGAAGAATTCACTTCAAGACCCCTACAATTATTTGCAATCATGGGATTTCAACAACAAAACAGAAGGATATATATGCAAATTTACTGGGGTAGAATGTTGGCATCCTGATGAAAATAGAGTCTTAAATCTCAAACTGTCAAACATGGGACTAAAGGGACAGTTTCCTCGCAGCATTCAGAATTGCTCAAGCTTGACAGGATTAGATCTTTCAATTAACAGACTCTCTCAAACCATTCCACAAGATATATCTACCCTTCTTAAGTTTGTGACAACTCTTGATCTATCATCAAATGATTTTACTGGGGATATCCCTTTGTCCCTTGCAAACTGTACTTATCTTAATAGTCTTAAACTTGATCAAAACCAACTCACAGGTCATATTCCTGCTGAATTGGCTTTGCTCCAAAGGCTTAAGTCATTTAGTGTCTCCAACAATCTTTTGACAGGGCAAGTTCCAGCCTTTAGAAATGGTATTGTTACAGCAGACAGTTATGCAAATAATTCAGGCCTCTGTGGTGTCCCCTTGGAGCAATGCCAGGCCATAGCTTCCAAGACTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTCACTGCTGCAGCATTAGGATTGGGTATTGGATTGTTCTTCTATGTGCGGCGCATGTCTTATAAGAAAAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTTAAGGGAACCAAAGCAATAAAGGTTTCTATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAAGGATCTCATGAAGGCTACTAGTAACTTCAGTAAAAGCAATATTATTGGGTCTGGAAGATCAGGAACTATTTACAAAGCTGTCCTTCATGACGGCACATCGCTCATGGTCAAGAGATTGCAGGAATCTCAACAACACACAGAGAAAGAATTTCTGTCTGAGATGGGAACGCTAGGGACTGTCAGACATCGTAACTTGGTTCCCCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTTCTGGTCTATAAAAATATGCCAAATGGTACCCTACATGATCAACTACATCCTGCTGATGGTGGGAGCACCATGGACTGGTCTCTAAGGCTCAAAGTTGCAATTGGAGCAGCAAGAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGCATCATCCACCGAAACATAAGCTCTAAATGCATCCTGTTGGACGTAGATTTTGAGCCCAGAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTATGCAAAAACTTTGATGGCTACACCTAAAGGGGATGTTTATAGCTTTGGGACTGTGCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCCATGTGGCTAAAGCTCCGGAAACTTTTAAAGGAAATTTGGTAGAATGGATTACACAGTTCTCTAGCAATTCAAAACTTCAGGATGCCATTGATGAATCACTAGTTGGGAAGGGTGTTGATCATGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTTACAGAAACTCCAAAGGAGAGGCCCACTATGTTTGAAGTATACCAGCTTCTAAGAGCTATTGGGAGTAGATATAATTTCACAATTGAGGATGAGATTATGATGCCTACAGATACTGGTGATACTGATAACTTAGAAGAACTTATTGTAGCTCGAGAGCAAACTGGTTGA 1860 0.4081 MLVKMVLSSRIFIASVVVSLFLLINCGMTYGTETDIFCLKNVKNSLQDPYNYLQSWDFNNKTEGYICKFTGVECWHPDENRVLNLKLSNMGLKGQFPRSIQNCSSLTGLDLSINRLSQTIPQDISTLLKFVTTLDLSSNDFTGDIPLSLANCTYLNSLKLDQNQLTGHIPAELALLQRLKSFSVSNNLLTGQVPAFRNGIVTADSYANNSGLCGVPLEQCQAIASKTNTAVIAGAAVGGVTAAALGLGIGLFFYVRRMSYKKKEEDPEGNKWARSLKGTKAIKVSMFEKSISKMNLKDLMKATSNFSKSNIIGSGRSGTIYKAVLHDGTSLMVKRLQESQQHTEKEFLSEMGTLGTVRHRNLVPLLGFCMAKKERLLVYKNMPNGTLHDQLHPADGGSTMDWSLRLKVAIGAARGLAWLHHSCNPRIIHRNISSKCILLDVDFEPRISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAKTLMATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWITQFSSNSKLQDAIDESLVGKGVDHELFQFLKVACNCVTETPKERPTMFEVYQLLRAIGSRYNFTIEDEIMMPTDTGDTDNLEELIVAREQTG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2853g00014 619 ProSiteProfiles Protein kinase domain profile. 306 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2853g00014 619 Gene3D Ribonuclease Inhibitor 33 222 IPR032675 -
Gabi2853g00014 619 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 382 601 - -
Gabi2853g00014 619 SUPERFAMILY Protein kinase-like (PK-like) 284 581 IPR011009 -
Gabi2853g00014 619 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Gabi2853g00014 619 SUPERFAMILY L domain-like 33 198 - -
Gabi2853g00014 619 Gene3D Transferase(Phosphotransferase) domain 1 382 600 - -
Gabi2853g00014 619 CDD STKc_IRAK 312 581 - -
Gabi2853g00014 619 Pfam Protein tyrosine and serine/threonine kinase 309 580 IPR001245 GO:0004672|GO:0006468
Gabi2853g00014 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 51 195 - -
Gabi2853g00014 619 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 267 381 - -
Gabi2853g00014 619 Gene3D Phosphorylase Kinase; domain 1 267 380 - -
Gabi2853g00014 619 FunFam Leucine-rich repeat receptor-like protein kinase 32 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2853g00014 Gabi-Chr2853 178692 181524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2853g00014 20 595 Receptor kinase-like Gene Family AT3G28450 46.299 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gabi2853g00014 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2853g00014 - - gmx:100817267 999.193