Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2853g00009 ATGCAAACCCTCTTATTGTCCTTTTTATTGTTCTTGTTATTATTATCATGTGCACCTCAGCAATTAGCCTCTTCCAAACACTTTCTCATTCAAACCAACAACAACAACAACAGAAGGATCCTCCATGAACCCTTTGTGCCAATGAACACTCTTTCTCCAAATGATCCACCAAAACCTCATTCAACTCATCCTTCTTCTTCTTCTTCTTCAACCCCAAAACCCAAATACCCATTTTCCACCACAACAACAACAACCACCACAAACCAATCACCATTTCCATTTTTCCCAACTTACCCCTCTTCACCACCACCACCACCACCACCTCCTTCACCAACCACCTTTGCTTCATTCCCTGCAAACATATCCTCTCTTGTTATTCCTCACTCCCCTCAACCTAACTCCTCTTCTAACAAACTCCTCCCCCTCGCCCTCTCCGCCGTCGCGTGCGCCGTCTTCGCCGTCGCCATTTTCGCCGGAATTTACTGTCGGCGACGCCGCCGGAACCGCCGCGCCGACGCCGCCGACAACAAGAGTCCAACTTCTGATAGCAGCCTCAGGTTGTTCCCGCACAATGCTCCCCCAACCGCCATGGGCACCTCCGAGTTTCTCTACCTAGGCACCGTCGTGAATTCCCGCGCAATCGAAGACGATTCCGACGGCGGCGATTTGCTTACTCGGAAAATGGAATCGCCGGAGCTCCATCCCCTCCCCCCGCTCTCGCGTCCGGCGCTGTACGGAGGAGTTCCGCCGCCGGCGCCGCCGCGGAGTGATGACGTGGGTTCGACAACCGCGGAGGAGGAAGAGGAGGAGTTTTTCTCGCCGAGAGGGTCGTCTCTGGGAGGCCGCGAGAGCTCCGGCGGAACCGGATCGGGTTCCCGGCGAGCGTTCTCCGCCATCATCGCCGCCGAGAGAAGCCGCGAATCGAGCTCTGGTTCTCCCCGCTCTTCCACTTCCGGTTCGCCGGACCGGTATCATTCGATCAGCCTTTCCTCGCCGGCGAGTTCAAGTCCCCGGAGTACACAACCAAAATCACCAGAATCCACACGTGCAATCTTATCACCAATTCACAACAATCAACAAGTGCAATCTTGTTCTTCATTGTGTTCATCATGCTCAACACCAGAGAGAGCTTTCGTTGAAGATGAAACAAATGCACGTGCATCGTCCTCACATGAGAGAATTTTGGAGAAAAAAGAAGATACATCACCATCACCATCACCATCACCATCACTAAGGTTATCTAATGCTTCCAATGGAAGTAGAAAGTCCATATCATCATCTTCAGCTTTTTCTCTGCCCTCTTCACCGGAGAAGGTGATGCATCATCACAGTTTGGATCAGTCTCCGAGGATGTCCAGTGTCTCCGACGGGTTAAGGTTACCGGGTTTGTCATCACTGCCTTTATCACCCGCCCTGGTTTTGTCACCAGAAACTGAAAGAGCACTTAATGGCACTTCAACAGTTGCTGATGGTGATGGCGTGGCTGTGGCACAGAGGAAACACTGGGACATTCCTGTACTATCAACAACAACACCCTCGCCGCCGCCACCACCACCACCACCACCCTTGCAGCGGCAGCGGAAGCACTGGGAAGTGCCAGGTCCCTCAACTCCTGTTGGTCAACCCATTTTACGGCCACCGGAATTAGTACCTCCTTTGAGGCCTTTTGTGTTGCAAAAGCCAACGAGTGTTTCCCCTGTTGAGTTGCCTCCGAGTTTGGGGGAAATTGAAGAGACCTTGAAACCCAAGCTGAAGCCCCTTCATTGGGACAAAGTTAGAACAAGCTCTGATCGTGAAATGGTGTGGGATCAGCTGAAGTCGAGCTCGTTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTTGTGAACACACCAAACTCAAAGTCCAAGGATGCTACTCCACACTCAGTTCTTCTCCCGCCAAATCAGGAGGACAGAGTTCTTGATCCCAAAAAGTCCCAAAATATTGCAATCTTGCTGAGAGCTCTCAATGTCACAATAGAGGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACCGATACAATTGGAACAGAATTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGTAAATTGAAGGAGCATAAAGATGACTCACCAACCAAGCTTGGTCTAGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTTGAAGCAATGCTGTACGTAGTCAATTTTGAGTCTGAAGTGGAGTATCTTAGGAAATCCTTTCAGACTCTTGAGGCTGCCTGTGAAGAGCTGCGAAATTGTAGAATGTTCTTGAAGCTTCTTGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCACAAGCCTTCAAACTTGATACACTTATCAAACTGGCTGATGTCAAAGGAGCAGATGGGAAAACAACACTACTGCATTTTGTTGTACAGGAAATTATTAGAACTGAAGGTGTTCGTCTCTCTGGTACTAACCAAAGTTCAAGCTCTACTTTGAGTGAAGATGCCAAGTGTAGGAAGCTTGGCCTACAAGTTGTATCTAATCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAGCAGTGATGTCCTTAAACTTTCCAAAGGAATTGCAAACATTGCAGAGGTTATGCAATTAAATAAAATGGCAGGATCAGATGAAAGCAGTCATAAATTTACAGAATCAATGAACAAATTCATTAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGCTTTGTCCCTTGTGAAGGAGATAACTGAGTATTTTCATGGGAACTTGACAAAGGAAGAAGCTCATCCATTTAGAATCTTTATGGTTGTAAGAGACTTTTTAGCAGTTCTTGACCGAGTTTGCAAAGAAGTTGGTATGATAAATGAGCGAACCATGGTTAGTTCAGCCCATAAATTCCCTGTTCCAGTTAACCCAATGCTTCCACAACCCCTTCCTGGATTACATGGAAGACAACAGTGTGATAACTCTTCAGGTGATGACAGTCCATAA 3078 0.4743 MQTLLLSFLLFLLLLSCAPQQLASSKHFLIQTNNNNNRRILHEPFVPMNTLSPNDPPKPHSTHPSSSSSSTPKPKYPFSTTTTTTTTNQSPFPFFPTYPSSPPPPPPPPSPTTFASFPANISSLVIPHSPQPNSSSNKLLPLALSAVACAVFAVAIFAGIYCRRRRRNRRADAADNKSPTSDSSLRLFPHNAPPTAMGTSEFLYLGTVVNSRAIEDDSDGGDLLTRKMESPELHPLPPLSRPALYGGVPPPAPPRSDDVGSTTAEEEEEEFFSPRGSSLGGRESSGGTGSGSRRAFSAIIAAERSRESSSGSPRSSTSGSPDRYHSISLSSPASSSPRSTQPKSPESTRAILSPIHNNQQVQSCSSLCSSCSTPERAFVEDETNARASSSHERILEKKEDTSPSPSPSPSLRLSNASNGSRKSISSSSAFSLPSSPEKVMHHHSLDQSPRMSSVSDGLRLPGLSSLPLSPALVLSPETERALNGTSTVADGDGVAVAQRKHWDIPVLSTTTPSPPPPPPPPPLQRQRKHWEVPGPSTPVGQPILRPPELVPPLRPFVLQKPTSVSPVELPPSLGEIEETLKPKLKPLHWDKVRTSSDREMVWDQLKSSSFKLNEEMIETLFVVNTPNSKSKDATPHSVLLPPNQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGSTDTIGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGLAEKFLKAVLDVPFAFKRVEAMLYVVNFESEVEYLRKSFQTLEAACEELRNCRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLIKLADVKGADGKTTLLHFVVQEIIRTEGVRLSGTNQSSSSTLSEDAKCRKLGLQVVSNLSSELANVKKAAAMDSEVLSSDVLKLSKGIANIAEVMQLNKMAGSDESSHKFTESMNKFIRMAEEEIPKIQAQESVALSLVKEITEYFHGNLTKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHGRQQCDNSSGDDSP 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 509 526 - -
Gabi2853g00009 1025 ProSiteProfiles Formin homology-2 (FH2) domain profile. 574 999 IPR015425 -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 379 400 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 505 544 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 278 292 - -
Gabi2853g00009 1025 PANTHER FORMIN-RELATED 8 1013 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi2853g00009 1025 SUPERFAMILY Formin homology 2 domain (FH2 domain) 512 985 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 167 192 - -
Gabi2853g00009 1025 Gene3D Formin, FH2 domain 577 982 IPR042201 -
Gabi2853g00009 1025 Pfam Formin Homology 2 Domain 579 973 IPR015425 -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 61 94 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 1001 1025 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 46 116 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 220 458 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 303 377 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 95 114 - -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 235 256 - -
Gabi2853g00009 1025 SMART it6_source 574 988 IPR015425 -
Gabi2853g00009 1025 MobiDBLite consensus disorder prediction 401 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2853g00009 Gabi-Chr2853 138602 143353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2853g00009 530 1015 FH2 protein (formin) Gene Family AT3G25500 73.887 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2853g00009 - - gmx:100801837 1050.81