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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gabi2853g00002
ATGGGTGTGGCTCAAAACATTCTTGATGTGGAGGAGGGAACCTTGGAGATTGGAATGGAATATAGAACTGTGTCTGGGGTTGCTGGACCATTGGTTATTCTTGATAAAGTTAAGGGACCCAAATATCAAGAGATTGTTAATATTCGCTTAGGGGATGGAACTACTCGGCGTGGACAAGTTCTAGAAGTTGATGGTCAAAAAGCTGTTGTTCAGGTCTTTGAAGGTACATCTGGGATTGACAATAAATTTACAACTGTGCAATTCACCGGTGAGGTGTTAAAAACTCCTGTATCGCTGGATATGCTTGGCCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCCATATTACCTGAGGCTTACTTGGACATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATATCTACAATTGATGTCATGAATTCTATTGCAAGAGGTCAAAAGATCCCTCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGCCGTCAGGCTGGCTTAGTCAAGCGATTAGAGAAGTCTGATAATCTTCTTGAGGATGGAGAAGAGGACAATTTTGCCATTGTGTTTGCAGCTATGGGAGTTAACATGGAGACTGCTCAGTTTTTCAAACGCGACTTTGAGGAGAATGGCTCCATGGAGAGAGTGACCCTTTTCCTTAATCTGGCAAATGATCCTACAATTGAGCGTATCATTACTCCTCGTATTGCTCTTACTACTGCTGAATATTTAGCATATGAATGCGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTACCAGGTAGACGTGGGTATCCTGGCTACATGTATACAGATCTTGCTACAATATACGAACGTGCTGGAAGAATTGAGGGTCGAAAAGGCTCTATTACGCAAATTCCAATTCTAACCATGCCAAATGATGATATTACGCATCCAACTCCTGATCTTACAGGATATATTACTGAGGGACAGATATATATTGACAGGCAACTGCATAACAGGCAGATATATCCACCAATCAATGTCCTTCCATCACTGTCTCGATTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGAAGGGATCATGCTGATGTGTCCAACCAGCTCTATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGCTGTATCTGGAGTTTTTGGACAAGTTTGAGAGGAAGTTTGTCGCACAAGGAGCTTATGACACCCGGAATATCTTCCAGTCACTAGATCTTGCATGGACATTGCTTCGGATCTTCCCCCGCGAGCTTCTTCATCGTATACCAGCAAAGACTCTTGATCTGTACTACAACAGAGATGCTGGTAATTGA
1467
0.4315
MGVAQNILDVEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGQKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLYYNRDAGN
488
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gabi2853g00002
488
CDD
ATP-synt_V_A-type_beta_N
20
91
-
-
Gabi2853g00002
488
FunFam
V-type proton ATPase subunit B, brain
29
488
-
-
Gabi2853g00002
488
Gene3D
-
29
487
-
-
Gabi2853g00002
488
PANTHER
V-TYPE PROTON ATPASE SUBUNIT B
6
485
IPR022879
-
Gabi2853g00002
488
PIRSF
V-ATPsynth_beta/V-ATPase_B
12
488
IPR022879
-
Gabi2853g00002
488
ProSitePatterns
ATP synthase alpha and beta subunits signature.
368
377
IPR020003
GO:0005524
Gabi2853g00002
488
SUPERFAMILY
P-loop containing nucleoside triphosphate hydrolases
94
383
IPR027417
-
Gabi2853g00002
488
Pfam
ATP synthase alpha/beta family, nucleotide-binding domain
147
377
IPR000194
GO:0005524
Gabi2853g00002
488
CDD
V_A-ATPase_B
92
385
-
-
Gabi2853g00002
488
NCBIfam
V-type ATPase subunit B
20
486
IPR005723
GO:0033180|GO:0046961|GO:1902600
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gabi2853g00002
Gabi-Chr2853
11262
17784
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gabi2853g00002
1
488
Primary Pumps ATPases(2)
AT4G38510
96.311
0.0
963
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gabi2853g00002
K02147
-
oeu:111389279
943.725
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