Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2845g00001 ATGGCATACGACAACAACGTTGATCTCTGTACTCATTTATCACTTGCTAGGTGTCCTTGTAATACAATGGTGTGTACCCATTTGTCACTTGGTAAGTGTCATTGCAACACAACCAATGAAGATGTCTTTGTTTCTTTAACCAAGAAGAGGAAGATTTCTGAAGAAACCTCTGTTGCTGCAAGAAAGAAGGTTTATGGAGAGAGAAGTTGGGGTTACTCAACCGATTTGATGTTTTGTGATGATCCCTGGAAGATCAAGAAAGTCCTCATTTGCAGTGATCTTGGCAACATGAGCAGGCTCTTGCTCCCTAAAGATTTGGCTGAGAATTTGGTGGTTCCGGTGTTGGATGGTGATGTTGAAAAAGGTGTTCAAGTTGAGATTTGGGATGTGGACACTGCCTCCATTCATTCTTTAGTTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGGAATTGGGTTAAAGATTTTGTATCAAGAAGAGGCTTAAAGAAAGGGGGATGA 510 0.4039 MAYDNNVDLCTHLSLARCPCNTMVCTHLSLGKCHCNTTNEDVFVSLTKKRKISEETSVAARKKVYGERSWGYSTDLMFCDDPWKIKKVLICSDLGNMSRLLLPKDLAENLVVPVLDGDVEKGVQVEIWDVDTASIHSLVFKKWVSSRSYVFIGNWVKDFVSRRGLKKGG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2845g00001 169 Gene3D - 82 169 IPR015300 -
Gabi2845g00001 169 CDD B3_DNA 83 168 IPR003340 GO:0003677
Gabi2845g00001 169 SUPERFAMILY DNA-binding pseudobarrel domain 81 168 IPR015300 -
Gabi2845g00001 169 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 48 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2845g00001 Gabi-Chr2845 16705 17214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2845g00001 57 168 B3 DNA Binding Superfamily AT3G24650 28.947 1.28e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2845g00001 - - aprc:113850604 177.563