Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00024 ATGTACAAGGGGAGATTCTGCACTGTTGGTGGAGTTAAGGCTCAGGTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGGCGTTTCAGGGATATTCTGGGCAAAGGAGCTATGAAGACTGTGTATAGAGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTCGGTGATGTCTGTCATTCACCAGAGCAACTTCAGCGTCTTTATTCAGAGGTTCATCTCCTCAAGCACCTCGACCATAAATCTATGATGATCTTCTATGGTTCATGGATCGACGTTTATAGCAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTTAGAGAGTATAGGCAGAAGTATAAGAGAGTAGATATCCGAGCAGTGAAGAATTGGACTCGCCAGATTCTAAGTGGTTTGGAGTATTTACATAACAATAATCCTCCTGTAATACACAGAGACCTCAAGTGTGATAATATCTTTGTTAATGGCCATCTGGGGCAAGTCAAGATTGGTGATTTGGGTCTTGCAGCTATACTTCGTAGCTCCCAACTTGCCCATAGTGTCATAGGTACACCAGAATTTATGGCACCAGAACTATATGAAGAGAAATACAATGAGCTGGTAGACATATACTCCTTTGGGATGTGTATGATAGAGATGCTTACTTTTGAGTTCCCATATAGTGAGTGTTCCAACCCAGCTCAAATATACAAAAAAGTTACTTCGGGGAAGTTACCAGATGCATTTTACAGAATCCAACATTTGGAAGCAAAGAGGTTCGTGGGAAGATGTTTAGTACATGTCTCAAAAAGACCACCAGCAAAGGAGCTTTTGTTGGACCCATTTTTAGCCACGGACCAACTTGAATCAATATTGCCAATCTCAATATTATCTACAAATCAAACTCCAAAGCTTATTTCCAATGAATTTGTTATCACTGAGCAACTTTCAATGGGTGATGATCAGGGAAAGAGCACAGATATGACAATCACTGGGTCAATAAATGAACAGGATAACACAGTTTTCCTTAAAGTGAAGATACCTGACAAAAATGGGCATACAAGAAATATATTATTTCCATTTGACACAAAAAAAGACAATGCTATTGAGGTAGCAAAGGAGATGGTTGAAGAACTTGAAATTAAACACTTGGAACTATTGGAGATTGCTGCAATGATAGACCATGAGATATCAGCTTTAGTTCCAAGTTATAGGGATCGGGGTACTTGTCAGCAACAACGACAGGACAGCTTTAACTATGAAGAAGATGCGGATGTCAATAATCATCATCCTCTTTTCTTATCATCTTCTCCATCTTCCTCTCAGTGTTCTCTTCCCATGTGTGGTTCCTCCTCCAAGATGTACTCTCTTGGGAACCATCACCCGTTTACTCAAGAAAGGCCAAAAGAAGATCTAATTATGAATGACAATGCAAGCTCTCTAAGCTCAATGAACTCTTACAAGTGTTCCAATTTCCAATACTGCGACTCATGCAATGATGAGCATGTCCCAAGAGTAGTAGTAGATGAAACTGAACGCAACAAGTGCACAAGATTATGCCGTGGGGAAGAGGCAGAAGCTAGTTTCCCCAAACAGTTTTTGTACCCCGGAATGGACTCTTGCGGTTGCAGATGTAGTGGTTCAAGCCATGGAAGGTCGAGGTTTACGAGGTTTCGTTCGTGCGTGGAGCGAATGAACCATCATTCGCTAATAATGGATGAGATATACAAGACACGGATGTTCAACACGGTTGGGGCCATGGAGAACATTGGGTTCTATTACCATCCAGAGAGAGGTGGATGCTTTCCTCGTTGA 1824 0.4156 MYKGRFCTVGGVKAQVGYVETDPSGRYGRFRDILGKGAMKTVYRAFDELLGIEVAWNQVKLGDVCHSPEQLQRLYSEVHLLKHLDHKSMMIFYGSWIDVYSRTFNFITELFTSGTLREYRQKYKRVDIRAVKNWTRQILSGLEYLHNNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRSSQLAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECSNPAQIYKKVTSGKLPDAFYRIQHLEAKRFVGRCLVHVSKRPPAKELLLDPFLATDQLESILPISILSTNQTPKLISNEFVITEQLSMGDDQGKSTDMTITGSINEQDNTVFLKVKIPDKNGHTRNILFPFDTKKDNAIEVAKEMVEELEIKHLELLEIAAMIDHEISALVPSYRDRGTCQQQRQDSFNYEEDADVNNHHPLFLSSSPSSSQCSLPMCGSSSKMYSLGNHHPFTQERPKEDLIMNDNASSLSSMNSYKCSNFQYCDSCNDEHVPRVVVDETERNKCTRLCRGEEAEASFPKQFLYPGMDSCGCRCSGSSHGRSRFTRFRSCVERMNHHSLIMDEIYKTRMFNTVGAMENIGFYYHPERGGCFPR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00024 607 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Gabi2843g00024 607 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Gabi2843g00024 607 Gene3D - 342 433 - -
Gabi2843g00024 607 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00024 607 CDD STKc_WNK 26 286 - -
Gabi2843g00024 607 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Gabi2843g00024 607 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Gabi2843g00024 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Gabi2843g00024 607 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 468 - -
Gabi2843g00024 607 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Gabi2843g00024 607 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00024 607 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00024 607 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00024 Gabi-Chr2843 366705 371478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2843g00024 16 428 MAP Kinase Kinase Kinase AT3G51630 66.828 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi2843g00024 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00024 K08867 - gmx:100272206 826.624