Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00021 ATGGGAAATTACAGGTTCAAATTATCAGATATGATGCCCAATGCTTGGTTTTACAAGCTGAGGGACATGGGAAGAGCAAGAAAGCAAACCCCAACTCAAACCAAGAAGAAAAAACAATCTTTATCAGCCTCAAACACAGTGTCATCAAAACCAAAGCAACCCCACCAATGCAATCCCAATCCCAGAAAGTCTTACTACTTTACAAGGGAGCTTAAGCCAAGTGATAGAATCTGCACTTCACCAGCAAATAACCAAAATATCTCAGACACCAATTTCCCTGAATCACCCAGAAAATCAACTAAACAAAGACCTAAGAGAAGAACTCCAAGGACTTCTTCACCTAAGCTTGTCACCTCTTCTGTCTCATCTCCACTTGATAGCTCTGCTGAATCAGAATTCCCTGAGCCAGAAATCAGAACAGACCGTGTTCTTCCCACTGAATCCTTTAATGAAATGGTTTTGTGGTCCAACTCTTGTGGCTGCAGGGTGTTCTCCAACTCCAATGATATCATTATTGATGTAGACAACAATTCTATAGCCAGAAAAGATGATAAGCTAGAAGGGTATGATTCTTTTTCAGACCTTGTGCTTCCACCAATTGGGAACAAGCCAGCAAAGTTCAATGAATTGCTGAGCCATGCTAAGAAGAAAGGAACTAAACCCAGAAGCAGGATCACTACACATGAAGAACAAAACATTCAAGGGTCTCTTAAAGTTAAAATTTTGAAGGAAGACACTGCATCAATGAAAGAAGAGAGGAACACCCCTTGTAGGAGATTCTCTGTGAGTTCTCCAGGAGTGAGGCTTAGGACTAATTCACCAAGAATTGCAAGCCGGAAAATTCAAGCACATGGCCGGAAAAGTGTATCGTCGGCCACCGGCTCGGGCTCCCGGAGAAGCCTCTCAGATAGCTTTGCAATTGTGAAGTCATCATTCAATCCACAAAGAGATTTCAGAGAGTCAATGGTGGAGATGATTGTGCAGAACAACATAAGAACATCAAAGGATTTGGAAGATCTTCTTGCCTGCTACCTTTCTTTGAATTCAGATGAGTATCATGACCTTATCATCAAAGTGTTCAAGCAAATATGGTTTGATTTGACTGATAATCAGTAG 1116 0.414 MGNYRFKLSDMMPNAWFYKLRDMGRARKQTPTQTKKKKQSLSASNTVSSKPKQPHQCNPNPRKSYYFTRELKPSDRICTSPANNQNISDTNFPESPRKSTKQRPKRRTPRTSSPKLVTSSVSSPLDSSAESEFPEPEIRTDRVLPTESFNEMVLWSNSCGCRVFSNSNDIIIDVDNNSIARKDDKLEGYDSFSDLVLPPIGNKPAKFNELLSHAKKKGTKPRSRITTHEEQNIQGSLKVKILKEDTASMKEERNTPCRRFSVSSPGVRLRTNSPRIASRKIQAHGRKSVSSATGSGSRRSLSDSFAIVKSSFNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDNQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00021 371 NCBIfam uncharacterized plant-specific domain TIGR01568 306 368 IPR006458 -
Gabi2843g00021 371 ProSiteProfiles OVATE domain profile. 307 366 IPR006458 -
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 248 269 - -
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 27 142 - -
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 77 97 - -
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 280 299 - -
Gabi2843g00021 371 Pfam Transcriptional repressor, ovate 311 367 IPR006458 -
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 111 129 - -
Gabi2843g00021 371 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Gabi2843g00021 371 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 369 IPR038933 GO:0045892
Gabi2843g00021 371 MobiDBLite consensus disorder prediction 35 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00021 Gabi-Chr2843 332974 334290 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi2843g00021 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00021 - - aprc:113863721 510.375