Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00014 ATGGAACGGAAGGGAAGTGTGCTTATGCAGCGATATGAACTGGGGAAATTATTAGGCCAAGGAACCTTTGCAAAGGTCTACCATGCTAGGAACCTTGTAACTGGCATGAGTGTGGCCGTTAAGGTAATTGATAAAGAAAAGATTTTGAAAGTTGGGATGATTGATCAGATTAAGCGTGAAATTTCAGTGATGAAATTAGTCAGACATCCACATGTGGTTGAGCTTTATGAGGTAATGGCCAGTAAAACCAAAATTTACTTTATCATGGAGTATGCAAAAGGTGGCGAGCTCTTCGACAAGGTAGCCAAAGGAAAGCTCAAGGTGGATGTTGCTAGGAAATATTTTCAGCAACTCATTTGTGCAGTTGACTACTGCCACAGCAGGGGCGTGTCTCATCGAGATTTAAAACCTGAAAATCTACTATTGGATGAAAATGAGAATTTGAAGGTTTCAGACTTTGGGTTGAGTGCCATTGCTGAATCTAAGTGCCAAGATGGATTACTCCACACTACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAAGGGTTATGATGGGAGCAAAGCTGATATATGGTCATGTGGGGTAATCTTGTATGTTCTATTGGCTGGTTATCTTCCATTCCAGGATTCAAATCTGATGGAGATGTACAGGAAAATAGGTAAAGGGGAATTCAAATTTCCTAAATGGTTTTCACCCGATGTTCGCCGGCTGTTGTCCAAAATCTTGGATCCAAACCCAAATACCAGGATATCAATGACCAATATCATGAAAAATTCTTGGTTTAGAACGGGGTTAGAGAAGCCTGTTATTATTGAAACCGAAAACAAAGGACTAGCTTCTCAGGATGCTGATGGAGCATTTGAAGTTTGTGAGAATAGTGGTCCTATTGCAGATTCAAATCAAGAACAGGCTAAGCCTTCTAATCTAAATGCTTTTGATATCATCTCCTTCTCAATTGGTTTTGATTTATCTGGTTTGTTTGAGGACACTCTTCATAAGAAAGAGATGCGGTTTACTTCTAACAAGCCTGTCTCAGTTATAATCTCTAGGTTGGAAGAAATTTGCAAGTGTCTTCACTTGAAAGTAAAGAAGAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCCAAGGAAGGCAGGAAAGGGGCTTTGGGTATTGATGCTGAGATTTTTGAGATTACTCCACTCTTTCATATGGTGGAACTTAAGAAGTCTAATGGGGATACCTTGGAGTTCCAGAAGCTTCTGGAACAGGACATTAGACCAGCACTTAAGGACATTGTTTGGACCTGGCAAGGAGAACAACCACAGCAACTCCAACATGAAGTAGTGCAGGAAGAGCAACAGCCTTCTCATACTGTCCCTGCCCAGTTAGAGGCTGTACCACAGTGA 1404 0.4124 MERKGSVLMQRYELGKLLGQGTFAKVYHARNLVTGMSVAVKVIDKEKILKVGMIDQIKREISVMKLVRHPHVVELYEVMASKTKIYFIMEYAKGGELFDKVAKGKLKVDVARKYFQQLICAVDYCHSRGVSHRDLKPENLLLDENENLKVSDFGLSAIAESKCQDGLLHTTCGTPAYVAPEVINRKGYDGSKADIWSCGVILYVLLAGYLPFQDSNLMEMYRKIGKGEFKFPKWFSPDVRRLLSKILDPNPNTRISMTNIMKNSWFRTGLEKPVIIETENKGLASQDADGAFEVCENSGPIADSNQEQAKPSNLNAFDIISFSIGFDLSGLFEDTLHKKEMRFTSNKPVSVIISRLEEICKCLHLKVKKKDGGLFKLEGSKEGRKGALGIDAEIFEITPLFHMVELKKSNGDTLEFQKLLEQDIRPALKDIVWTWQGEQPQQLQHEVVQEEQQPSHTVPAQLEAVPQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00014 467 Pfam NAF domain 311 369 IPR004041 GO:0007165
Gabi2843g00014 467 FunFam Non-specific serine/threonine protein kinase 2 295 - -
Gabi2843g00014 467 CDD STKc_SnRK3 11 265 - -
Gabi2843g00014 467 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Gabi2843g00014 467 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Gabi2843g00014 467 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Gabi2843g00014 467 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Gabi2843g00014 467 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Gabi2843g00014 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gabi2843g00014 467 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00014 467 CDD CIPK_C 315 429 - -
Gabi2843g00014 467 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00014 467 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2843g00014 467 Gene3D Kinase associated domain 1, KA1 308 434 - -
Gabi2843g00014 467 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Gabi2843g00014 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 429 - -
Gabi2843g00014 467 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00014 Gabi-Chr2843 221200 225294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2843g00014 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 66.079 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi2843g00014 Pkinase 5.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00014 K07198 - gmx:100811923 766.918