Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00008 ATGGGTACTAGTTCTTTCTCCATGACCATTCCAATCATCAAAGTTCGTTTCTTCTTATGCTTTTGCCTTATTGGGATAGCCTCAGCTAAGTTGTCCTCTAATTTTTACGCAAGAACGTGTCCTAATGTGCTTTCAACCATTAGGATGGCAGTAAAGTCTGCTGTTAACAATGAAGCTCGCATGGGGGCTTCCCTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGCGATGGATCAGTACTATTGGACGATACTTCGACTTTCACAGGTGAGAAGACAGCGTTTCCCAACGCTAATTCGCTCAGAGGTTTTGACGTAATAGACACCATCAAGTCTCAAGTTGAGAACTTATGCCCCGGTGTTGTCTCTTGTGCTGATATCGTCGCTGTAGCAGCAAGAGATTCAGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCAATTGGGCAGAAGAGACTCAACCACAGCAAATATAAGTGCTGCTAACTCAGACTTGCCAGCTCAAACTTTGGATTTAAGTGGCCTTATCACTTCTTTCTCCAACCAAGGTTTCACAACTAATGAAATGGTTACTCTTTCAGGAGCGCACACAATTGGCCAAGCGAGGTGTACAAAGTTTAGAACAAGGATTTACAATGAAACCAACATAGATTCCTGTTTTGCAAAATCATTGGAAGCAAACTGTCCTAGCACAGGTGGTGATGACAATTTGTCCAATCTTGATGTCACAACTCCAAACACCTTTGACAATACTTACTTCAAGAGTTTGCAGATCAAAAAGGGACTCTTGCACTCAGATCAACAACTTTTCAATGGAGGATCCACAGACTTACAAGTGAATTGTTATAGCAGTAATCCTGGAAGTTTCAGAAATGATTTTGCCAATGCAATGGTTAAAATGGGGAATCTTAGCCCACTCACTGGGTCTCGTGGCCAGATTAGGACCAACTGTAGGACGATCAACTGA 972 0.427 MGTSSFSMTIPIIKVRFFLCFCLIGIASAKLSSNFYARTCPNVLSTIRMAVKSAVNNEARMGASLLRLHFHDCFVQGCDGSVLLDDTSTFTGEKTAFPNANSLRGFDVIDTIKSQVENLCPGVVSCADIVAVAARDSVVALGGPSWTVQLGRRDSTTANISAANSDLPAQTLDLSGLITSFSNQGFTTNEMVTLSGAHTIGQARCTKFRTRIYNETNIDSCFAKSLEANCPSTGGDDNLSNLDVTTPNTFDNTYFKSLQIKKGLLHSDQQLFNGGSTDLQVNCYSSNPGSFRNDFANAMVKMGNLSPLTGSRGQIRTNCRTIN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00008 323 CDD secretory_peroxidase 30 320 IPR033905 GO:0004601|GO:0042744
Gabi2843g00008 323 Gene3D - 34 320 - -
Gabi2843g00008 323 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 Gene3D Peroxidase, domain 2 168 302 - -
Gabi2843g00008 323 Pfam Peroxidase 48 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 SUPERFAMILY Heme-dependent peroxidases 31 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 PANTHER PEROXIDASE 72-RELATED 26 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 FunFam Peroxidase 168 302 - -
Gabi2843g00008 323 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Gabi2843g00008 323 ProSiteProfiles Plant heme peroxidase family profile. 30 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00008 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Gabi2843g00008 323 FunFam Peroxidase 34 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00008 Gabi-Chr2843 144721 148021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2843g00008 26 323 Peroxidase AT5G05340 65.667 1.40e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00008 K00430 - gmx:100815142 514.227