Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00007 ATGGGTACTACCTCAGCTAAGTTGTCCTCTAATTTTTACGCAAGAACGTGTCCTAATGTGCTTTCAACCATTAGGATGGCAGTAAAGTCTGCTGTTAACAATGAAGCTCGCATGGGGGCTTCCCTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGCGATGGATCAGTACTATTGGACGATACTTCGACTTTCACAGGTGAGAAGACAGCGTTTCCCAACGCTAATTCGCTCAGAGGTTTTGACGTAATAGACACCATCAAGTCTCAAGTTGAGAACTTATGCCCCGGTGTTGTCTCTTGTGCTGATATCGTCGCTGTAGCAGCAAGAGATTCAGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCAATTGGGCAGAAGAGACTCAACCACAGCAAATATAAGTGCTGCTAACTCAGACTTGCCAGCTCAAACTTTGGATTTAAGTGGCCTTATCACTTCTTTCTCCAACCAAGGTTTCACAACTAATGAAATGGTTACTCTTTCAGGAGCGCACACAATTGGCCAAGCGAGGTGTACAAAGTTTAGAACAAGGATTTACAATGAAACCAACATAGATTCCTGTTTTGCAAAATCATTGGAAGCAAACTGTCCTAGCACAGGTGGTGATGACAATTTGTCCAATCTTGATGTCACAACTCCAAACACCTTTGACAATACTTACTTCAAGAGTTTGCAGATCAAAAAGGGACTCTTGCACTCAGATCAACAACTTTTCAATGGAGGATCCACAGACTTACAAGTGAATTGTTATAGCAGTAATCCTGGAAGTTTCAGAAATGATTTTGCCAATGCAATGGTTAAAATGGGGAATCTTAGCCCACTCACTGGGTCTCGTGGCCAGATTAGGACCAACTGTAGGACGATCAACTGA 903 0.4308 MGTTSAKLSSNFYARTCPNVLSTIRMAVKSAVNNEARMGASLLRLHFHDCFVQGCDGSVLLDDTSTFTGEKTAFPNANSLRGFDVIDTIKSQVENLCPGVVSCADIVAVAARDSVVALGGPSWTVQLGRRDSTTANISAANSDLPAQTLDLSGLITSFSNQGFTTNEMVTLSGAHTIGQARCTKFRTRIYNETNIDSCFAKSLEANCPSTGGDDNLSNLDVTTPNTFDNTYFKSLQIKKGLLHSDQQLFNGGSTDLQVNCYSSNPGSFRNDFANAMVKMGNLSPLTGSRGQIRTNCRTIN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00007 300 PRINTS Haem peroxidase superfamily signature 39 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Haem peroxidase superfamily signature 101 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Haem peroxidase superfamily signature 220 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PANTHER PEROXIDASE 72-RELATED 6 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 ProSitePatterns Peroxidases active site signature. 39 50 IPR019794 GO:0004601
Gabi2843g00007 300 FunFam Peroxidase 145 279 - -
Gabi2843g00007 300 SUPERFAMILY Heme-dependent peroxidases 8 300 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 Gene3D - 11 297 - -
Gabi2843g00007 300 PRINTS Plant peroxidase signature 17 36 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 234 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 81 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 274 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 41 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 119 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 100 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 166 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 PRINTS Plant peroxidase signature 218 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 Gene3D Peroxidase, domain 2 145 279 - -
Gabi2843g00007 300 CDD secretory_peroxidase 7 297 IPR033905 GO:0004601|GO:0042744
Gabi2843g00007 300 FunFam Peroxidase 11 153 - -
Gabi2843g00007 300 ProSiteProfiles Plant heme peroxidase family profile. 7 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 Pfam Peroxidase 25 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2843g00007 300 ProSitePatterns Peroxidases proximal heme-ligand signature. 167 177 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00007 Gabi-Chr2843 144691 148021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2843g00007 6 296 Peroxidase AT5G05340 66.894 7.87e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00007 K00430 - gmx:100815142 486.878