Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2843g00004 ATGGCTTCTAGGGAGCGAAGAGAGGCTCTTCAACACAAGCTGCAACAACTTCGTGATGTCACAAACTCCAGCTCTGTGAACAAAGCCTCAATTATTGTGGATGCTTCCAAATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAACACAGAGCTGGGAATAGGAGAATCATCAACCACTCAAATTGATCAACTACCTATGGTGACTGTGAAAACCCTAGAAAAGGGTTTCCTCATTAATGTGTTTTTAGAAAAGAATTGCCCTGGTATGCTTGTTTCAATACTCGAAGCCTTTGAAGAACTGGGACATGATGTGCTTGATGCTACGGTTTCTTGTGAAGACACTTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTCACGAGAACGACAGTATTGACGCGCAAGTGGTGAAGCAAGCAGTGTTGCAAGCAATCAAGAACACGGACTAA 450 0.44 MASRERREALQHKLQQLRDVTNSSSVNKASIIVDASKYIEELKQKVEGLNTELGIGESSTTQIDQLPMVTVKTLEKGFLINVFLEKNCPGMLVSILEAFEELGHDVLDATVSCEDTFQLEAVGGESHENDSIDAQVVKQAVLQAIKNTD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2843g00004 149 Gene3D - 1 56 IPR036638 GO:0046983
Gabi2843g00004 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Gabi2843g00004 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 55 IPR036638 GO:0046983
Gabi2843g00004 149 Coils Coil 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2843g00004 Gabi-Chr2843 86368 88881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2843g00004 2 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 34.483 2.73e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2843g00004 - - gmx:100527466 234.187