Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi283g00003 ATGGATCGGGCGTCGGTGACGGTTGGACCGGGCATGGACATGCCGATCATGCACGACAGTGACCGTTACGATCTGGTCCGAGATATCGGGTCCGGGAATTTCGGCGTGGCGAGGTTGATGCAGGACAAGCAGACCAGGGAGCTAGTTGCTGTCAAGTATATCGAACGTGGTGATAAGATTGATGAAAATGTCAAGAGAGAAATCATTAATCATAGGTCTCTCAGACACCCTAACATTGTTAGGTTTAAGGAGGTCATTTTGACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTCTTTGAGCGAATCTGCAATGCTGGGCGTTTTACTGAGGACGAGGCTCGTTTCTTCTTTCAACAACTAATTTCTGGGGTCAGTTATTGCCACGCAATGCAAGTATGTCATCGGGACCTAAAGTTGGAAAACACTTTGTTGGATGGAAGCCCAGCGCCTCGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCGCAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGCTGAGACAAGAGTATGATGGCAAGATTGCAGATGTTTGGTCCTGTGGAGTAACGTTATATGTGATGCTAGTCGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTCCGGAAGACAATTCAGAGAATTCTCAGTGTCCAGTATTCTATTCCAGATTTTGTTCAAATATCTCCAGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCAGAGAGAATCACCATGCCTGAAATTTGGAACCATGAATGGTTTTTGAAGAATCTCCCTGCGGACCTGATGGATGAGAAGATAATGGGTAACCAATTTGAGGAGCCAGACCAACCCATGCAGGGCATTGATATAATCATGCAGATAATTTCAGAAGCTACAATACCAGCAGCTGGGACCTATTCTTTAGACCAGTTGATGGCAGATAACATTGATATGGATGATGACATCGATGAATTAGAATCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAAATAGTGTATGCCATATAA 1089 0.4408 MDRASVTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTRELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYSIPDFVQISPECRHLISRIFVFDPAERITMPEIWNHEWFLKNLPADLMDEKIMGNQFEEPDQPMQGIDIIMQIISEATIPAAGTYSLDQLMADNIDMDDDIDELESESELDIDSSGEIVYAI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi283g00003 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Gabi283g00003 362 PANTHER SERINE/THREONINE KINASE 22 309 - -
Gabi283g00003 362 Coils Coil 327 347 - -
Gabi283g00003 362 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Gabi283g00003 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Gabi283g00003 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi283g00003 362 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Gabi283g00003 362 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Gabi283g00003 362 SUPERFAMILY Protein kinase-like (PK-like) 15 310 IPR011009 -
Gabi283g00003 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi283g00003 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi283g00003 362 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi283g00003 Gabi-Chr283 57539 62411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi283g00003 22 289 CBL-interacting serine-threonine protein kinases AT4G24400 43.321 3.04e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gabi283g00003 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi283g00003 K14498 - gmx:100806949 664.07