Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00035 ATGTTTCATTTGTTTTATAAAAGACCCATTTCGTTGAAGCAAATGGAACACGAGAAAGCCCCAATCTTGGAAGCAAGTTCCAGGGAGGAAATTGAGATGCACAAAGTTGATGTTCTTCCTATGACAACGGGGTCATCTTGCAATTCTGTTTGTCCTTTTTCCAGACATGAACACAGTGTTGTGGCATCAAAAGAGTCATCAAAGTCAGCAAAGAAACTTTCTTTACTCATAGTTTTCTATGTTATTGTTATGATTGTGGAAGTTATTGGTGGTGTAAAAGCCCACAGCCTAGCTGTCATCGGTGATGCAGCACACTTGCTTTCTGATATTGCTGGATTCTCTGTCTCTCTCTTTGCAGTTTGGGCTTCAGGTTGGGAGGCAACACCCCATCAATCTTTTGGATACAATCGTCTTGAAGTTTTGGGTGCTCTTATATCTGTGCAGTTAATTTGGGGTATATCTGGTTTTTTAATATATGAAGCAGTTGGTAGACTTCTTCACCAAAATGAGAGGGTGAATGGAATGCTCATGTTTACAATTTCAGCATTTGGATTTGTTCTTAACTTTATCATGGTTGTATGGCTTGGTCATGATCATAGTCATGATCATGGCTGTGGAGACTCACATCATGATCATAGTCATCATCATGGTTGTGGAGACTCAGATCATGATCATGGGATGGATGAGCTACCTAAAATAACTGATGAGGAGAACCTTGCCCTGGTTTCAAGTAGTCAGAAAAATACTAATGTTTTGAACATAAATCTCCAAGGGGCCTATTTGCATGTCATGGTTGATATGATTCAATCTGTTGGGGTGATGATTGCTGGAGCCATAGTATGGGCTGAACCAGAGTGGTTTATGGTTGATCTTTTATGCACTCTTATATTCTCTGTTTTATCTTTAAGTACTACCCTGCCAATGCTTAGGAATATTTATAGCATTCTGATGGAGAGGACACCAAGCGGGATCAATATCATTGAGCTGGAATATGGCCTCAGAGGTATCAAGGGAGTGCAGGATGTTCATGACTTGCACGTTTGGGCCATAACAGTCGGGAAAAATGTTCTATCTTGCCATGTAGTGGCTGAGCCTGGCATCAGTTCCATTGATTTACTAGGCACGATTAAGCATTACTGTGTAAAAACATATCAAATACAACATGTAACCATACAAATTGAGTAA 1185 0.4 MFHLFYKRPISLKQMEHEKAPILEASSREEIEMHKVDVLPMTTGSSCNSVCPFSRHEHSVVASKESSKSAKKLSLLIVFYVIVMIVEVIGGVKAHSLAVIGDAAHLLSDIAGFSVSLFAVWASGWEATPHQSFGYNRLEVLGALISVQLIWGISGFLIYEAVGRLLHQNERVNGMLMFTISAFGFVLNFIMVVWLGHDHSHDHGCGDSHHDHSHHHGCGDSDHDHGMDELPKITDEENLALVSSSQKNTNVLNINLQGAYLHVMVDMIQSVGVMIAGAIVWAEPEWFMVDLLCTLIFSVLSLSTTLPMLRNIYSILMERTPSGINIIELEYGLRGIKGVQDVHDLHVWAITVGKNVLSCHVVAEPGISSIDLLGTIKHYCVKTYQIQHVTIQIE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00035 394 Pfam Cation efflux family 75 317 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi2838g00035 394 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 41 394 - -
Gabi2838g00035 394 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 328 394 IPR036837 -
Gabi2838g00035 394 Gene3D Cation efflux protein transmembrane domain 69 316 IPR027469 -
Gabi2838g00035 394 MobiDBLite consensus disorder prediction 205 226 - -
Gabi2838g00035 394 SUPERFAMILY Cation efflux protein transmembrane domain-like 69 318 IPR027469 -
Gabi2838g00035 394 NCBIfam cation diffusion facilitator family transporter 71 394 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00035 Gabi-Chr2838 332566 334252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00035 15 394 Inorganic Solute Cotransporters AT2G29410 48.303 1.30e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00035 K14689 - gmx:100789520 523.087