Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00023 ATGGGGGAAGAGGTTAAGATGAGTGACTACGATGAAGAACGGGTCATGGAGTGGGAGATGGGCCTCCCCACGGCCCATGATCTCACCCCTCTTTCTCAGCTCTTGATCCCGCCGGAGCTCGCTTCCGCCTTCAGCATCTCGCCGGAGCCCCACCGCACACTCCTCGATGTTAACCGCGCCTCTCGCAACACCCTCTCCACTCTTCGCGGCGGCCACCAGGCCTTCTCCTCCAACAACAACCACCTCGACGACGACGATGAGGAGGAGGAAGAAGACACCGATCGTGACGGGTCGGGCTCCGATCCCAGGAAACACCGGAAGATCGATTGCGCGGCGGAGGAAGCGGATTCGGCCCTGCGGACGGAGAACTCCGGCGACCGGACTGCCGTGAAGAGGCCTCGGCTGGTGTGGACCCCGCAACTGCACAAACGGTTCGTGGACGTGGTGGCGCACCTCGGGATCAAGAACGCGGTTCCGAAAACGATTATGCAGCTGATGAACGTCGAAGGGTTGACCCGCGAAAATGTGGCTAGCCACCTTCAGAAGTATCGTCTTTACTTGAAGAGGATGCAAGGTCTCTCCAACGATGGTCCTTCTTCCTCGGATCAGCTTTTTGCATCAACCCCTGTTCCACAGAGCTTGCATGAGTCTGGTGCTGCTGTAAGTGCCCATTCTCATGGAAATAATGGGCACCTTCCACTTCCAATTCCAATGCCTTATCCCCCTCCTATGATGTCAATGCCTGTCATTGGGATGCCACATGGCCATGGTCATCGCCATGGCCATGGCCACATGGGGATCCCAATGGGCACTTCTTCTGCCACTTCCCCTTATCATTCCTTCGACTCTCATCCATATAACAACATGTTGCAGCAAAGGGATTGGACTCACCTTGCTCCTAATGATAAATAA 912 0.5603 MGEEVKMSDYDEERVMEWEMGLPTAHDLTPLSQLLIPPELASAFSISPEPHRTLLDVNRASRNTLSTLRGGHQAFSSNNNHLDDDDEEEEEDTDRDGSGSDPRKHRKIDCAAEEADSALRTENSGDRTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDGPSSSDQLFASTPVPQSLHESGAAVSAHSHGNNGHLPLPIPMPYPPPMMSMPVIGMPHGHGHRHGHGHMGIPMGTSSATSPYHSFDSHPYNNMLQQRDWTHLAPNDK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00023 303 MobiDBLite consensus disorder prediction 194 230 - -
Gabi2838g00023 303 MobiDBLite consensus disorder prediction 194 224 - -
Gabi2838g00023 303 MobiDBLite consensus disorder prediction 68 128 - -
Gabi2838g00023 303 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Gabi2838g00023 303 SUPERFAMILY Homeodomain-like 130 189 IPR009057 -
Gabi2838g00023 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 188 IPR017930 -
Gabi2838g00023 303 MobiDBLite consensus disorder prediction 96 128 - -
Gabi2838g00023 303 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 267 IPR044841 GO:0003700|GO:0006355
Gabi2838g00023 303 Gene3D - 128 191 - -
Gabi2838g00023 303 Pfam Myb-like DNA-binding domain 136 184 IPR001005 -
Gabi2838g00023 303 FunFam Two-component response regulator 128 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00023 Gabi-Chr2838 246121 248654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00023 1 266 G2-like Transcription Factor Family AT3G46640 55.116 1.68e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi2838g00023 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00023 - - aprc:113858844 453.366