Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00015 ATGTGCTCAGCTGCAGAAGACAAGGAGGTAGTTTCAGTATTAGAAGACTGGGGAGGGCAGGAACTCGATGGACTTTCACCTTGCATGGTCGATACACAGGGGATGAAAGATCCACTTTTGGACTCCGATTCCAATATTTTCTATATGAATGTGGAGCCTAATATCACTTCGGACAAAATATTGGTAACAGATTCTATCCTACCAGTTGATATGCCACAATCTTCTAATGTTGATGCAGTTATTGTTGAACCTTATGTTGGAATGGAATTTGAATCATTTAAAAGAGTTGAACATTTTTATACATTATTTGCTAAAGCAAAGGGGTTTGGGATCCGTATTCGCTCTAGTAAAAAAAATTACGGACTTTTTGTATGTTGTAAGCACGGTGAAAATAGCAAGAAAGGCTGTAACATGGGAGATGCTAAGAAAAAGTCTTCAACTATTCGCTCGGGATGTAAAGCATCACTTTCTGTGACAAAGGAAAAGAATCGAGACATATGGGTTATCAAATCTTTTGACAACAATCATAATCATATCATGGCTAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGAATGGTGCTGCAAGAAGACTTGTTGAACAGTTTAATGAAGAAGGTTTGCCTACCGGAAAGGTTGCTGCAATGTTTAATGGCAGCGATTTAGCTTTTTCTAATCGGGATTGTTGGAATCAATTGAGAAATCTTCGAAGGAAGAATTTGGATGTTGGAGATGCATTAGCTGTTTTTAATTACTGCAAACAAAAGCAAGCTCAAAATTCTGATTTTTTCTATTCAATACAATGTGATGCTGATGATAGAATGATAAACTTCTTTTGGGTGGATGCTAGATCAAGGTACGCTTATCAACAGTTTGGAGATGTAATTACTTTTGATACCACATATAGAACCAACAAATATAGCATGCTGTTTGCCCCATTTACTGGATTAAACCATCATCTTCAATCAATTTTATTTGGTTGTGCCTTATTACAAGATGAAACCGAGAAATCTTTTACATGGTTATTTGAAACTTGGCTTGAGGCAATGAATGGAAAAAAGCCAGTTTCTATAATAACTGATCAAGATTTAGCTATTGGAGCTGCTGTGGCCAAGGTATTTCCAGAAACTCGTCATCGTTTGTGCTTGTGGCACATTAGAAAGAAGTTTCCTGAAAAGCTTGCACACATATATCACAAGAATTCTACATTCAAGCGTGAGCTGAAAAGGTGTATTCGAGAATCACCAACCATCAAAGAATTTGAAAATGAATGGAAAAATATAATGGTTACATACGATTTGCAGAAAAATGTATGGTTCAAAGATTATTTGAAATTAGAGAGTCGTGGATACCGGTATATAATAGAAGCATATTTTTTGTCGGTATGA 1398 0.3605 MCSAAEDKEVVSVLEDWGGQELDGLSPCMVDTQGMKDPLLDSDSNIFYMNVEPNITSDKILVTDSILPVDMPQSSNVDAVIVEPYVGMEFESFKRVEHFYTLFAKAKGFGIRIRSSKKNYGLFVCCKHGENSKKGCNMGDAKKKSSTIRSGCKASLSVTKEKNRDIWVIKSFDNNHNHIMASPKSVSYLRCHKKMNGAARRLVEQFNEEGLPTGKVAAMFNGSDLAFSNRDCWNQLRNLRRKNLDVGDALAVFNYCKQKQAQNSDFFYSIQCDADDRMINFFWVDARSRYAYQQFGDVITFDTTYRTNKYSMLFAPFTGLNHHLQSILFGCALLQDETEKSFTWLFETWLEAMNGKKPVSIITDQDLAIGAAVAKVFPETRHRLCLWHIRKKFPEKLAHIYHKNSTFKRELKRCIRESPTIKEFENEWKNIMVTYDLQKNVWFKDYLKLESRGYRYIIEAYFLSV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00015 465 PANTHER OS01G0519700 PROTEIN 77 444 - -
Gabi2838g00015 465 Pfam MULE transposase domain 298 392 IPR018289 -
Gabi2838g00015 465 Pfam FAR1 DNA-binding domain 98 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00015 Gabi-Chr2838 140120 142334 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2838g00015 MULE 8.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00015 - - vvo:131633311 577.015