Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00008 ATGCTTTCTACAGATTCCCTTCTGGAAAATTTTCCTGGTTCCGTGAACCGATGTATATTTGAAAACGGTCCTATCTCGGTATGTTTGAATCAAAACCCAGGAACTGGTTTAAAGTTGGAAGATTCATCATCATCTCCTTCAAACCATTCAGAATCCCCTAGTGATTCTGATCCTTCTTATGTTACAAGCTCAAATGGAGAATCTGCAGAGAGTACTAAACATTCCAATCCCATTCTGAGATACATAAGCGACATCCTCATGGATGAAGAAGATGACCTAGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAAGCTGCTGAAAAACAATTCTATGACGTGCTGGGTCGTAGCTATCCTTCGTCACCCCGCCAACTCCATGGTTGTTACCCTGATGATAACCCTGACCCAGGTGATAATTTTGGTAGATCTACTAGTTCTGATAGCAATAGCAGTTACACCACTGATAATTCCTATGAGTCTGATAATAGGGTTAACAGTGGTGGTGATTTTGAGTCTTCTTTCCTGCAAAGGTCTTTAGTTGATTCCCCAGAAAACACCTATGATATTGGTCCTGCTCCATTTAGAGAGACACTAGCTGGTCTTCATTTTTCAAATTTAAATGGAGCCTGGAATATCATTCATTCAGAGAGCAAGCCATGGATGATTGAAGAGAGTGTGATGCAGGGTTCCACAGCAGCCGGAGGACCAAGGGAAAAGAGAAGCCATCATATGGATGATATCTCACATGAAGAAGTGGAGAGAGGAACCAAGCTTTCAGCTGTATACTCTGATGATTCAGAGCCATCAGAAATGTTCGATGAGGTACTGCTTTGTCGTGATGGTAAAAGTCCATCCATTTTTGAGAATGGTCGCGAATCATCACACGTTGCTGACTCAGGAGGGTCTAATGGAAAGACAACACGTTCAAAGAAAGGTTCCAACAAGGGAACAAGTACAAGTACAATGGTAGATTTATGGACTATGCTAACTCAATGTGCACAGGCAGTGGCTAGCTATGACCAAAGGAATGCAAGTGAAATACTGAAGCAGATTAGGCAGCACTCTTCACCTTTTGGTGATGGACTTCAGCGTTTGTCTCATTACTTTGCTGATGGCCTTGAGACACGATTAGCTGCTGGAACACCAAAGTATATGCTCTTGTCTGCATCTGCTGCAGATATGTTAAAAGCTTACAAAGTATACATCACAGCATGTCCATTTGTCAGGATGTCAAATTTCTTGGCTAATAGAACTATTTTGAAGCTAGTAGAAAATGAAAGCAGTCTTCACATTATTGATTTTGGGATTTCCTATGGTTTCCAGTGGCCTTGCCTTATTCAGCGTCTTTCAGAAAGGCCAGGTGGGCCTCCAAGGCTTCGTATTACAGGAATTGATCTTCCTCAATCAGGGTTTAGGCCTGCAGAAAGGGTTGGGGAGACAGGGAGGCACCTTGAAAAGTACTGCAAGAGGTTCCAAGTCCCATTTGAGTACAATTGCCTTGCACAGAAATGGGAAACTATAAAAGTTGAGGACCTCAAGATTGATAGAAATGAAGTAACTGTGGTTAACTGTTTGCACAGATTGAAGAACCTATCTGATGAAACTGTGACTGTGGACAGTCCAAGAGATGCTGTGTTAAGGTTGATCAGGAGGATAAATCCAAACATCTTCATACATGGGGTTGTCAATGGCACTTATAATGCACCATTTTTCCTGACTCGTTTCAGGGAGGCACTCTTCCATTTTTCAGCATTGTTTGATATGTTTGAGGCTAATACACTTCCTGAAGATCCATATAGGCTGATGTTTGAGAAAGGGATATTTGGAAGGGATGCTGTGAATGTCATAGCTTGTGAGGGGCCACAGAGAGTTGAAAGGCCAGAGACCTATAAGCAGTGGCAGGTTAGGAACAAGAGAGCAGGGTTCAAGCAACTTCCACTGGCTCCACAACTCTTGAATAGTATGAAAGAAAAGATTAAGAAGGAACATCATAAAGATTTTGTAGTCGATGAGGATGGCAAGTGGGTTTTACAAGGATGGAAAGGCCGTATTCTTCATGCTCTTTCTTCTTGGGTTCCTGCTTAA 2094 0.4241 MLSTDSLLENFPGSVNRCIFENGPISVCLNQNPGTGLKLEDSSSSPSNHSESPSDSDPSYVTSSNGESAESTKHSNPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKQFYDVLGRSYPSSPRQLHGCYPDDNPDPGDNFGRSTSSDSNSSYTTDNSYESDNRVNSGGDFESSFLQRSLVDSPENTYDIGPAPFRETLAGLHFSNLNGAWNIIHSESKPWMIEESVMQGSTAAGGPREKRSHHMDDISHEEVERGTKLSAVYSDDSEPSEMFDEVLLCRDGKSPSIFENGRESSHVADSGGSNGKTTRSKKGSNKGTSTSTMVDLWTMLTQCAQAVASYDQRNASEILKQIRQHSSPFGDGLQRLSHYFADGLETRLAAGTPKYMLLSASAADMLKAYKVYITACPFVRMSNFLANRTILKLVENESSLHIIDFGISYGFQWPCLIQRLSERPGGPPRLRITGIDLPQSGFRPAERVGETGRHLEKYCKRFQVPFEYNCLAQKWETIKVEDLKIDRNEVTVVNCLHRLKNLSDETVTVDSPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSALFDMFEANTLPEDPYRLMFEKGIFGRDAVNVIACEGPQRVERPETYKQWQVRNKRAGFKQLPLAPQLLNSMKEKIKKEHHKDFVVDEDGKWVLQGWKGRILHALSSWVPA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 239 257 - -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 290 321 - -
Gabi2838g00008 697 Pfam GRAS domain family 330 694 IPR005202 -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 286 321 - -
Gabi2838g00008 697 ProSiteProfiles GRAS family profile. 319 695 IPR005202 -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 234 257 - -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 125 172 - -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 141 172 - -
Gabi2838g00008 697 MobiDBLite consensus disorder prediction 37 75 - -
Gabi2838g00008 697 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 259 688 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00008 Gabi-Chr2838 93117 95947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00008 242 697 GRAS Transcription Factor Family AT1G07530 56.652 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2838g00008 GRAS 4.4e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00008 - - gmx:100815586 1048.11