Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00007 ATGTCCATGTCCTCCATCACCGATCCCTTCATGGAAGAATCTGACTTCTCAGAAATTATGAACTTCATGAGCCAAACCTTGATGGAAGAGAACGTTGAAGAGATGCCGTTTTTTGACCCTCTTAGCTTGCAAGTCACCGAGAAATTATTCTATGATGCTCTCACTGATAACTTACCTCATTCCCCCAATCAACACCCCCTCGATATTCTTAGTCCCGACGGTGGAGCCACCACCACCAGCAGCAGCAGCAGCAGCGGCGGCGGCGCTAGCAACTCTTTAGATGACAATTCTCGTGAGTTGAAGCCCCCTTCTCCTGATACCCCTCTTTCTGTTTCTTGTGATAATGATTCTCATTATAATTCCCCTGCCATTTCTCAACATCCTTCTAATAGTGTTGCTGTTAGTGATGGACTGTTAGATTTGGATTCTTCTATTACCAAAATGTTGTCACAAAATGTTTTCAGTGAGGCAGATTCTGTCTCCCTGTTTAGGAGAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCTCCATCACCTCAGCTTGTAACTGGTCTTGATTCACTTGGAGAATCATTTGGGGAGAATTCCGTTGGGTTGAAGGGTAGAAAGAATCATGAGCGTGAAGGAAGTGATAGCAAAGAAGAAGGGAGAAGTAATAAGCAATCAGCAGTTGGTGTTGTTGATGAGAGTGAGTTATCAGAAATGTTTGATAAAGTGTTGCTTAATGTAGAGAATGTGTCCCTGTGTAAGGAATTGAAAGCTGAACAGGCAGGTGAAAAGTTTGATGGAGAGATTGCTCATCCTATGAAACAAGGAAGGAAGAAGGAAACAGTGGATTTGAGGTCTCTTCTGCTTCTGTGTGCACAAGCTATGTATGTCAATGACAATAGTACTGCCAATGAACTTCTAAAGGAGATTAGACAGCATTCTTCTCCCTTTGGGGATGCATCACAGACTTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGGCTGGCAATGGTACAGGTGCACAAGGATTTTATTACTCTATGAGCTCCAAGAGGATCACTGCTGCTGAGTTTTTGAAAGCTACCGATGTTTATCTATCTGCCTGCCCTTTCAAGAAGTTTGCATATTTATTTGCAAATAACATGATTATGAAAGCAGCTGAAAAGGCAGAAACCCTTCATATTATTGATTTTGGCATCCTATTAGGTTTTCGGTATCCTGTATTTATTAAGTTTTTATCAAAAAGAGATGGTGGACCTCCAAAGCTGAAGATCACGGGGATAGAGTTTCCCCAACCTGGCTTTCGTCCTGCAGAAAGAATTGAGCAGACTGGTCAACGTCTGGCTAACTATTGCAAGCGTTTCAACGTTCCGTTTGAGTTCAATGCCATAGCATCACGGAACTGGGAAAACATTCAAGTACAAGACCTTAAAATTGAGAGCAACGAGCTAGTTGCTGTGAACTGTCTGTTCAGGTTTAAGAATTTACTGGATGAGACTTTTGAGGCAAACAGTCCTAGAAATGCAGTTCTCCACTTGATCCGGAAGATAAATCCGGATATTTTTGTTCAGTCAGTCATTAATGGATCTTATAATTCCCCTTTCTTTGTCACACGGTTCAGGGAGGCGCTTTTCCATTTTTCTGCTTTGTATGATATGTGTGACAATGTCATACCCCGTGAAAATCCAAGTAGGATGATGATTGAGAGAGAGATTGTGGGTCGGGAGGCTATAAATGTTATAGCATGTGAAGGTTTCCAGAGGGCTGAGAGGCCCGAGACATACAAACAATGGCAGGTTAGGAATACGAGGGCTGGTTTCAAGCAGCTCCCACTGGATAAGAAATTAATGGCCAAATTTAGGGCCAATTTAAGGGAATTGTACCACAAAGATTTTGTATTTGATGAAAACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTACCGGCATAA 1971 0.4262 MSMSSITDPFMEESDFSEIMNFMSQTLMEENVEEMPFFDPLSLQVTEKLFYDALTDNLPHSPNQHPLDILSPDGGATTTSSSSSSGGGASNSLDDNSRELKPPSPDTPLSVSCDNDSHYNSPAISQHPSNSVAVSDGLLDLDSSITKMLSQNVFSEADSVSLFRRGLEEASKFLPPSPQLVTGLDSLGESFGENSVGLKGRKNHEREGSDSKEEGRSNKQSAVGVVDESELSEMFDKVLLNVENVSLCKELKAEQAGEKFDGEIAHPMKQGRKKETVDLRSLLLLCAQAMYVNDNSTANELLKEIRQHSSPFGDASQTLAHYFANGLEARLAGNGTGAQGFYYSMSSKRITAAEFLKATDVYLSACPFKKFAYLFANNMIMKAAEKAETLHIIDFGILLGFRYPVFIKFLSKRDGGPPKLKITGIEFPQPGFRPAERIEQTGQRLANYCKRFNVPFEFNAIASRNWENIQVQDLKIESNELVAVNCLFRFKNLLDETFEANSPRNAVLHLIRKINPDIFVQSVINGSYNSPFFVTRFREALFHFSALYDMCDNVIPRENPSRMMIEREIVGREAINVIACEGFQRAERPETYKQWQVRNTRAGFKQLPLDKKLMAKFRANLRELYHKDFVFDENNNWMLQGWKGRILYASTCWVPA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00007 656 Pfam GRAS domain family 279 653 IPR005202 -
Gabi2838g00007 656 ProSiteProfiles GRAS family profile. 270 654 IPR005202 -
Gabi2838g00007 656 MobiDBLite consensus disorder prediction 61 130 - -
Gabi2838g00007 656 MobiDBLite consensus disorder prediction 198 217 - -
Gabi2838g00007 656 MobiDBLite consensus disorder prediction 73 98 - -
Gabi2838g00007 656 MobiDBLite consensus disorder prediction 108 130 - -
Gabi2838g00007 656 MobiDBLite consensus disorder prediction 192 223 - -
Gabi2838g00007 656 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 649 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00007 Gabi-Chr2838 65676 68714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00007 19 656 GRAS Transcription Factor Family AT1G07530 46.781 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2838g00007 GRAS 1.2e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00007 - - gmx:100795855 847.425