Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00004 ATGGATCCAAACTTGCAGGGATCTATTGATTTCATAAACAGTTACCAGTTTGGTGAAGACAGCAACACAATCGTGTGGGATCAAAATCAATACGAAACCGATTGGGATGTTAACGGAATCCTTCTTGATCAGCCTTATGCGGATTCACTTGGTTTTTCTCTGCATACAAACCCTGTAGAAGGTGAAGGTGCCTCTGCAGATCCTTCACTAGAAGACAATGATTTCTCAGAAACCGTCAAATTCATAAGCCAAGTTCTGATGGAAGAGAACGTTGAACAGAGGCCGTTTTATGACCCTCTGAGCTTGCAAGTCACTGAGAAATCATTCTATGATGCTCTCACTGAAAACATACCTCTTTCCCCTAATCAACACCCCCTTGATATTCTGAGTCACGACGGTGGAGCCACCAGCAGCAGCAGCAACAGCGGCGGCGGCGCTAGCAACTCTTTAGATGACAATTCTCGTGAGTTGAAGCCCCCTTCTCCTGATACCCCTCTTTCTGTTTCTTGTGATCATGCATTTCAGTTTGACTCCCATGCCATTTCTCAACATCTTTCCACTAGTGTTACTGTTAGTGATGGACTGTTAGATTTGGATTATTCTACTACCAAAATGTTGGCACAAAATATTTTCAGTGACGCAGATTCTGTCTCCCAGTATAGGAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCCAGGACCTCAGCTTGTAACTGGTCTTGAATCAAAGGGAGAATCATTCAGTGTGGTTGGGGTGAATTCTGTTGCGTTGAAGGGTAGAACGAATCATGAGCGCGAAGGAGGTGATACCAGAGAAGAAGGGAGAAGTAGCAAGCAATCAGCAGTTGGTGTGGTTGATGAGAGTGACTTATCAGATATGTTTGATCAAGTGTTGCTTAGTGTGGAGAAACCACTCTGTAATGAACATGGTTGCTTGCAGAATGGAACAGTGACAGCCGACAAGGCAGGTGAAAATTCACCTTCATCTAATGGAGGGAAGGCTCGTCCTAAGAAACAAGGAAAGAAGAAGGAAACCGTGGATTTGAGGAGTCTTCTGCTTTTATGTGCACAAGCTGTGTATGTCAATGACAATAGGACTGCCAATGAACTACTAAAGCAGATAAGGCAACATTCTTCTCCCTTTGGAGATGCATCGCAAAGGTTGGCTCATTATTTTGCCAATGGCCTTGAGACACGCTTGCTCGGTGATGCTACGGGTTCACAAGGACTTTTTAACTCTCTGACCTTCAGGAGGATCACTGCTGCTGAGTTTTTGAAAGCTTACCAAGTTTTTATATCTGTTTGCCCTTTCAAGAGGTGTGCATATTTCTTTGCAAATAAAATGATTATGAAAGCAGCTGAAAAGGCAGAAACCCTTCATATTATTGATTTTGGTATCCAATATGGTTTCCAGTGGCCATTTCTTATTAAGTTTTTATCAGATAGAGATGGTGGACCTCCCAAGCTAAAGATCACTGGCATAGAGTGGCCCCAACCTGGCTTTCGTCCCACAGAAAGAAATGAGCAGACTGGTTGTCGTCTGGCTAACTATTGCAAGCGTTTCAACGTTCCCTTTGAGTACAATGTCATAGCATCACGTAACTGGGAAACCATTCAAGTACAAGACTTTAAAATTGAGAGCAACGAGCTAGTTGCTGTAAATTGTATGATGAGGTTTGAGAATTTAATGGATGAGACTTTTGAAGTCAACAGTCCTAGAAATGCAGTTCTGCAGTTGATCAGGAAGATAAATCCGGATGTTTTTGTGCAGTGCATCGTTAATGGATCTTATAATGCCCCTTTCTTTGCCACACGTTTCAGGGAGGCGCTGTTCCATTTTTCTGCTATGTTTGATATGTGTGACTGTGTCATATCCCGTGATAACGAAAAGAGGATGATGCTTGAGAGGGAACTTTTAGGTCGGCATGCTCTCAATGCTATAGCATGTGAAGGCTTCCAGAGAATTGAGAGGCCTGAGACATACAAACAGTGGGAAGTTAGGAATACGAGGGCTGGTTTCAAGCATCTTCCACTGAATGAGGAATTAATGGCCAAATTAAGGACCAAGTTCAAGGAATGGTACCATAGAGATTTTGTATTTGATGTAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCATCTACCTGTTGGGTGCCTGTATAA 2181 0.4305 MDPNLQGSIDFINSYQFGEDSNTIVWDQNQYETDWDVNGILLDQPYADSLGFSLHTNPVEGEGASADPSLEDNDFSETVKFISQVLMEENVEQRPFYDPLSLQVTEKSFYDALTENIPLSPNQHPLDILSHDGGATSSSSNSGGGASNSLDDNSRELKPPSPDTPLSVSCDHAFQFDSHAISQHLSTSVTVSDGLLDLDYSTTKMLAQNIFSDADSVSQYRRGLEEASKFLPPGPQLVTGLESKGESFSVVGVNSVALKGRTNHEREGGDTREEGRSSKQSAVGVVDESDLSDMFDQVLLSVEKPLCNEHGCLQNGTVTADKAGENSPSSNGGKARPKKQGKKKETVDLRSLLLLCAQAVYVNDNRTANELLKQIRQHSSPFGDASQRLAHYFANGLETRLLGDATGSQGLFNSLTFRRITAAEFLKAYQVFISVCPFKRCAYFFANKMIMKAAEKAETLHIIDFGIQYGFQWPFLIKFLSDRDGGPPKLKITGIEWPQPGFRPTERNEQTGCRLANYCKRFNVPFEYNVIASRNWETIQVQDFKIESNELVAVNCMMRFENLMDETFEVNSPRNAVLQLIRKINPDVFVQCIVNGSYNAPFFATRFREALFHFSAMFDMCDCVISRDNEKRMMLERELLGRHALNAIACEGFQRIERPETYKQWEVRNTRAGFKHLPLNEELMAKLRTKFKEWYHRDFVFDVDNNWMLQGWKGRILYASTCWVPV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00004 726 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 285 719 IPR005202 -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 260 285 - -
Gabi2838g00004 726 ProSiteProfiles GRAS family profile. 340 724 IPR005202 -
Gabi2838g00004 726 Pfam GRAS domain family 349 723 IPR005202 -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 260 277 - -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 121 168 - -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 132 155 - -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 318 344 - -
Gabi2838g00004 726 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00004 Gabi-Chr2838 41585 44496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00004 78 725 GRAS Transcription Factor Family AT1G07530 47.293 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2838g00004 GRAS 6.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00004 - - gmx:100795855 876.7