Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00002 ATGGATCCTCATTTCAAGTTCAATTTCGTCAACGGATTTAAAGTCAACCAAGTGCCTATTATGCTCAATGTAGGGGATCAGTGCCTTGACCCTGTAAATGGGATGAGATCCATCCACTCTGGATTCATGGATAACCGGTTTCGTCTTCCACCTGATCCAAACGATGCTCAAATTCCTGATTCCCTCTCCACCATTACTACGGAAGAAGACTCTGATCCCTTGGATGAGACTGATTTCTCTGCTACCGTCCTACGCTACATAAACCAAATGCTTATGGAAGAGGACCTGGAGGAGAAGCCCTGCATGTTTCATGATTCTTTGGCTCTTCAAGCCGCTGAGAAATCATTCTATGAGGTCATTGGTGAGGCATACCCTTCTTCTTCCATCCAAAACTATCACAAAGTGGAGAGCCCTGATGACAGTCTCTATAGTAACTTCATCGATTTTAGCAGTTGCAATACCACTAGTACTAGCAACGCGGTTGAGTCCCATTGGAGTAACATGGATCTTACTGAGTACAAGCATTCTTTCCTTCAAACCAATTTTCCTGCTGACTTTGTTTTCCAGGCGAGTTCAACCTATTGTACGCAATCTTCTATGAATAGCACTAGTAGCTTCATTGTAAACAATATTGGATTCTTGGAAAGTCCCAGGGCTGGATTTTTAGATTCAAACTTGCTTAACAAGAGTGAGTCTATACTGCAATTTGAGAAAGGTGTGGAGGAAGTCAGTAAGTTTCTGCCTAAAAGGAATCCATTGGTTATTGACCTGGAGAACAGCACTTTTAGCCATTCTTTTAGAAAGTCTCCTCGGCAGGTTGTAATTGAGACGGGGAGAGATAAATGGGAGCATTTCTCGGCTGAGTCAAGAGGAAGGAAGAATCATGAGCGGGAGGATGAAACAGATTTACAAGATGGGAGAAGCAACAAGCACTCAGCTGTTTGCATGGATGACAATGAGTTATCAGAATTATTTGATAAGGTACTGCTACCCCAGAGGTGGGGAAATGAGGCAGCTCCTCTGAGTAATTGTAAAAAAGACCAGCCGAATGGACCAAGCATGAGCAAGCAGCAGAAAGAAGAAAACAACAAGTCTTGTAGTGGAAAGAGCCATGTTAAGAAACAAGACAATAATAAGAAGGGAGTTGTGGATCTGAGGACACTATTGATTGTATGTGCACAAGCTGTTTCTTTTAATGATCGTGCAACTGCTAATGAGTTATTGAAGCAGATAAGGCAACATTCTTCCCCGCTGGGTGATGGGTCTCAGAGGCTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCTTGGCTGGCACTGGCACTCAGATTTATACTGCTTTATCCTCCAAAAGAACCTCTGCTGCAGACATGGCCAAAGCTTACCAAATGTATATTTCAGCCTGCCCATTCCAGAAGCTTGCACTTATTTTTGCAAACCTTACAATTTTGAAACTTGCCAAGGAAGTGGAAACTCTTCATATTGTAGATTTTGGCATCCTTTATGGCTTCCAGTGGCCTTCACTTATTTATCATCTCTCAAAACGACCTGGTGGACCTCCCAAGCTGCGCATGACAGGGATAGAGCTCCCTCAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAAGAGACAGGCCTTCGCTTGGCAAGGTATTGTGATCGATTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAGAATTGAGGACTTGAAGATAAAGAAAAATGAATTTGTTGCAGTGAATTGTTTGGTTCGATTTAAGAATCTACTTGATGAGACAGTTGTGTGGAATAGCCCCAAGGATACTGTTTTAAATTTAATTAGGAAGGCAAATCCCACTATCTTTATACATACTATTGTCAATGGGAGCTATAATGTCCCATTCTTTGTGACACGGTTCCGGGAGGCTCTTTTTCATTACTTTTCATTGTTTGATGTGCTTGACACCAATGTTGCTCGTGAAGATCCCATGAGGTTGATGTTTGAGGAGGTGTTCTTTGGGAGAGAGGTAATGAATATTATAGCTTGTGAGGGTTCTAAGAGAGTTGAGAGGCCCGAGACATACAAGCAATGGCAAGGTCGGAACATGAGGGCTGGGTTTAGGCAACTTCCTTTGGATCAACATCGCATTAACAAATTAAGATGCAAGTTGAGAGAAGTGTACCACAGTGATTTCATGCTAGATGAAGATGGCAACTGCATGCTGCAAGGTTGGAAGGGCCGAATTATTTATGCTTCCTCCTGTTGGGTTCCAGCATAG 2277 0.4291 MDPHFKFNFVNGFKVNQVPIMLNVGDQCLDPVNGMRSIHSGFMDNRFRLPPDPNDAQIPDSLSTITTEEDSDPLDETDFSATVLRYINQMLMEEDLEEKPCMFHDSLALQAAEKSFYEVIGEAYPSSSIQNYHKVESPDDSLYSNFIDFSSCNTTSTSNAVESHWSNMDLTEYKHSFLQTNFPADFVFQASSTYCTQSSMNSTSSFIVNNIGFLESPRAGFLDSNLLNKSESILQFEKGVEEVSKFLPKRNPLVIDLENSTFSHSFRKSPRQVVIETGRDKWEHFSAESRGRKNHEREDETDLQDGRSNKHSAVCMDDNELSELFDKVLLPQRWGNEAAPLSNCKKDQPNGPSMSKQQKEENNKSCSGKSHVKKQDNNKKGVVDLRTLLIVCAQAVSFNDRATANELLKQIRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMAKAYQMYISACPFQKLALIFANLTILKLAKEVETLHIVDFGILYGFQWPSLIYHLSKRPGGPPKLRMTGIELPQPGFRPAERVQETGLRLARYCDRFNVPFEFNAIAQKWETIRIEDLKIKKNEFVAVNCLVRFKNLLDETVVWNSPKDTVLNLIRKANPTIFIHTIVNGSYNVPFFVTRFREALFHYFSLFDVLDTNVAREDPMRLMFEEVFFGREVMNIIACEGSKRVERPETYKQWQGRNMRAGFRQLPLDQHRINKLRCKLREVYHSDFMLDEDGNCMLQGWKGRIIYASSCWVPA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00002 758 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 324 749 IPR005202 -
Gabi2838g00002 758 ProSiteProfiles GRAS family profile. 376 756 IPR005202 -
Gabi2838g00002 758 Pfam GRAS domain family 385 755 IPR005202 -
Gabi2838g00002 758 MobiDBLite consensus disorder prediction 362 378 - -
Gabi2838g00002 758 MobiDBLite consensus disorder prediction 339 378 - -
Gabi2838g00002 758 MobiDBLite consensus disorder prediction 285 310 - -
Gabi2838g00002 758 MobiDBLite consensus disorder prediction 346 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00002 Gabi-Chr2838 7720 10874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00002 83 758 GRAS Transcription Factor Family AT1G07530 54.066 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2838g00002 GRAS 4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00002 - - ahf:112736647 1108.59