Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2838g00001 ATGGATCCTCATTTCAAGTTCAATTTCGTCAACGGATTTAAAGTCAACCAAGTGCCTATTATGCTCAATGTAGGGGATCAGTGCCTTGACCCTGTAAATGGGATGAGATCCATCCACTCTGGATTCATGGATAACCGGTTTCGTCTTCCACCTGATCCAAACGATGCTCAAATTCCTGATTCCCTCTCCACCATTACTACGGAAGAAGACTCTGATCCCTTGGATGAGACTGATTTCTCTGCTACCGTCCTACGCTACATAAACCAAATGCTTATGGAAGAGGACCTGGAGGAGAAGCCCTGCATGTTTCATGATTCTTTGGCTCTTCAAGCCGCTGAGAAATCATTCTATGAGGTCATTGGTGAGGCATACCCTTCTTCTTCCATCCAAAACTATCACAAAGTGGAGAGCCCTGATGACAGTCTCTATAGTAACTTCATCGATTTTAGCAGTTGCAATACCACTAGTACTAGCAACGCGGTTGAGTCCCATTGGAGTAACATGGATCTTACTGAGTACAAGCATTCTTTCCTTCAAACCAATTTTCCTGCTGACTTTGTTTTCCAGGCGAGTTCAACCTATTGTACGCAATCTTCTATGAATAGCACTAGTAGCTTCATTGTAAACAATATTGGATTCTTGGAAAGTCCCAGGGCTGGATTTTTAGATTCAAACTTGCTTAACAAGAGTGAGTCTATACTGCAATTTGAGAAAGGTGTGGAGGAAGTCAGTAAGTTTCTGCCTAAAAGGAATCCATTGGTTATTGACCTGGAGAACAGCACTTTTAGCCATTCTTTTAGAAAGAAGAATCATGAGCGGGAGGATGAAACAGATTTACAAGATGGGAGAAGCAACAAGCACTCAGCTGTTTGCATGGATGACAATGAGTTATCAGAATTATTTGATAAGGTACTGCTACCCCAGAGGTGGGGAAATGAGGCAGCTCCTCTGAGTAATTGTAAAAAAGACCAGCCGAATGGACCAAGCATGAGCAAGCAGCAGAAAGAAGAAAACAACAAGTCTTGTAGTGGAAAGAGCCATGTTAAGAAACAAGACAATAATAAGAAGGGAGTTGTGGATCTGAGGACACTATTGATTGTATGTGCACAAGCTGTTTCTTTTAATGATCGTGCAACTGCTAATGAGTTATTGAAGCAGATAAGGCAACATTCTTCCCCGCTGGGTGATGGGTCTCAGAGGCTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCTTGGCTGGCACTGGCACTCAGATTTATACTGCTTTATCCTCCAAAAGAACCTCTGCTGCAGACATGGCCAAAGCTTACCAAATGTATATTTCAGCCTGCCCATTCCAGAAGCTTGCACTTATTTTTGCAAACCTTACAATTTTGAAACTTGCCAAGGAAGTGGAAACTCTTCATATTGTAGATTTTGGCATCCTTTATGGCTTCCAGTGGCCTTCACTTATTTATCATCTCTCAAAACGACCTGGTGGACCTCCCAAGCTGCGCATGACAGGGATAGAGCTCCCTCAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAAGAGACAGGCCTTCGCTTGGCAAGGTATTGTGATCGATTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAGAATTGAGGACTTGAAGATAAAGAAAAATGAATTTGTTGCAGTGAATTGTTTGGTTCGATTTAAGAATCTACTTGATGAGACAGTTGTGTGGAATAGCCCCAAGGATACTGTTTTAAATTTAATTAGGAAGGCAAATCCCACTATCTTTATACATACTATTGTCAATGGGAGCTATAATGTCCCATTCTTTGTGACACGGTTCCGGGAGGCTCTTTTTCATTACTTTTCATTGTTTGATGTGCTTGACACCAATGTTGCTCGTGAAGATCCCATGAGGTTGATGTTTGAGGAGGTGTTCTTTGGGAGAGAGGTAATGAATATTATAGCTTGTGAGGGTTCTAAGAGAGTTGAGAGGCCCGAGACATACAAGCAATGGCAAGGTCGGAACATGAGGGCTGGGTTTAGGCAACTTCCTTTGGATCAACATCGCATTAACAAATTAAGATGCAAGTTGAGAGAAGTGTACCACAGTGATTTCATGCTAGATGAAGATGGCAACTGCATGCTGCAAGGTTGGAAGGGCCGAATTATTTATGCTTCCTCCTGTTGGGTTCCAGCATAG 2205 0.4263 MDPHFKFNFVNGFKVNQVPIMLNVGDQCLDPVNGMRSIHSGFMDNRFRLPPDPNDAQIPDSLSTITTEEDSDPLDETDFSATVLRYINQMLMEEDLEEKPCMFHDSLALQAAEKSFYEVIGEAYPSSSIQNYHKVESPDDSLYSNFIDFSSCNTTSTSNAVESHWSNMDLTEYKHSFLQTNFPADFVFQASSTYCTQSSMNSTSSFIVNNIGFLESPRAGFLDSNLLNKSESILQFEKGVEEVSKFLPKRNPLVIDLENSTFSHSFRKKNHEREDETDLQDGRSNKHSAVCMDDNELSELFDKVLLPQRWGNEAAPLSNCKKDQPNGPSMSKQQKEENNKSCSGKSHVKKQDNNKKGVVDLRTLLIVCAQAVSFNDRATANELLKQIRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMAKAYQMYISACPFQKLALIFANLTILKLAKEVETLHIVDFGILYGFQWPSLIYHLSKRPGGPPKLRMTGIELPQPGFRPAERVQETGLRLARYCDRFNVPFEFNAIAQKWETIRIEDLKIKKNEFVAVNCLVRFKNLLDETVVWNSPKDTVLNLIRKANPTIFIHTIVNGSYNVPFFVTRFREALFHYFSLFDVLDTNVAREDPMRLMFEEVFFGREVMNIIACEGSKRVERPETYKQWQGRNMRAGFRQLPLDQHRINKLRCKLREVYHSDFMLDEDGNCMLQGWKGRIIYASSCWVPA 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2838g00001 734 MobiDBLite consensus disorder prediction 266 287 - -
Gabi2838g00001 734 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 298 725 IPR005202 -
Gabi2838g00001 734 Pfam GRAS domain family 361 731 IPR005202 -
Gabi2838g00001 734 ProSiteProfiles GRAS family profile. 352 732 IPR005202 -
Gabi2838g00001 734 MobiDBLite consensus disorder prediction 315 354 - -
Gabi2838g00001 734 MobiDBLite consensus disorder prediction 322 337 - -
Gabi2838g00001 734 MobiDBLite consensus disorder prediction 338 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2838g00001 Gabi-Chr2838 7720 10874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2838g00001 83 734 GRAS Transcription Factor Family AT1G07530 53.210 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2838g00001 GRAS 3.6e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2838g00001 - - ahf:112736647 1072