Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2836g00020 ATGGTTTCGCTTCATCCAGTAGCGTCTCCTTTCTCTGTTTCCTCTTCTTCATCCTCTTTTCTTAGCGACTCTATTCAGTTTCGTCGTTTTTCCCCAAAACCGAGAAGCAGCTTCGTAACTAAAGGTCGTTTTTTCTTCTTCTGCAATGCTTCATGGCAAGAGCTTGCTGGAGTTTTACTATTCTCAGCGATTCCTTTCACCGCCGTGAAAGCCATAGCTAATAGTTCGTTGGGAGAATCGCTTCAGCGGAAAATGGAGGAGACAAAGAAATTTTCTGTTGAAAACTCTTCCAAATTCAAGGCCTTCGCAGAGAAGGCCAGAAAGGAGAGTTTTTGGTATGGAGAAGATAGACCTCGTTGGCTTGGTCCTATTTCATATAGCTACCCATCATATCTTACTGGGGAACTGCCTGGGGATTATGGCTTTGACATTGCTGGGCTTGGCAAGGATCCTGTGGCACTGAAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTCGGTGCTCTAGTTCCTGAAATATTAGACCTATTGGGAGCCTTTCACTTTGTAGAACCTGTCTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTGGATTACCTTGGCATACAAGGTCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCAGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGGATATATCTTCCTGGTGATATAAATTATCCTGGAGGAGCATTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCTTTTGAGGAGCTGAAGGTGAAAGAAATAAAAAATGGACGCTTAGCAATGATTGCCTGGTTAGGTTTTTACATGCAAGCAGCTGTGACGGGTAAAGGTCCTGTGCAGAACCTTGTTGAGCACATCTCCGATCCTTTTCACAATAACTTGCTGGGCTCACTCAACTTCATGAAAGTAGTCTAG 1014 0.4438 MVSLHPVASPFSVSSSSSSFLSDSIQFRRFSPKPRSSFVTKGRFFFFCNASWQELAGVLLFSAIPFTAVKAIANSSLGESLQRKMEETKKFSVENSSKFKAFAEKARKESFWYGEDRPRWLGPISYSYPSYLTGELPGDYGFDIAGLGKDPVALKKYFNFEILHARWAMLASVGALVPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMIAWLGFYMQAAVTGKGPVQNLVEHISDPFHNNLLGSLNFMKVV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2836g00020 337 Pfam Chlorophyll A-B binding protein 129 304 IPR022796 -
Gabi2836g00020 337 SUPERFAMILY Chlorophyll a-b binding protein 111 329 - -
Gabi2836g00020 337 Gene3D Chlorophyll a/b binding protein domain 119 330 - -
Gabi2836g00020 337 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 84 328 IPR001344 GO:0009765|GO:0016020
Gabi2836g00020 337 FunFam Chlorophyll a-b binding protein, chloroplastic 119 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2836g00020 Gabi-Chr2836 346682 350380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2836g00020 28 332 Chloroplast and Mitochondria Gene Families AT1G76570 76.797 4.87e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2836g00020 K14172 - gmx:100786260 554.673